Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0601 ATGTCGAAAGCATGGGGTAACATTGGAGCCTGGGCTGCAGATTCGGAGCGCGCCGAAGCTGAAGAGCGCGAAGCTGAAGTTGTCGTTCAAACCGCCGGATCGCAGAATTTCCCGAGCCTGAAGGAAGCTGTCAACGCAAAACAGCCTAAGAAGAAGAAGATGACGCTATCTGAGTTTACCAAACTCGCCGCCGGAGGCAGTGGTGGTGGTTCGTCTGAGTACCGCGGATTGACACCGGACGAGATGCTCCGTCTCCCTACTGGCCCCAAGGAGCGTTCGGCGGAGGAAATGCAGTTCAGCCGCGGTGGATTCTCTTCCTATGGCCGCTCTGGTGGGCCTTCTAGAGACCGAGATGACAACCGCGATGGTTCATGGGGCGGAGGGAGAAGATCATATGGCGGATTCGATGAAGAACCACGTAGAGGGAACAATTCTAGGGTTTTGGAATTGGATCAGCCTTCGAGAGCTGACGAGGTTGATAATTGGGCGTCTGTAAGGAAACCCTTGCCGTCGTTCGATTCTGGACGGCAGAATCGATACGGTTCGAATGGTGGTGGTCCTAGAGGTGATGGCAGCTTTGGCGGTAGTCCTAGAGGCGGTGGTGGCTTTGGTGGTGATCCTAGAGGCGATGGCGGTTTTAGCGGTGGTCCTAGAGGTGATGTTGGTTTTGGTGGTGGTTCTAGGGCTGATGGTGTGGATAACTGGGCGGTTGGGAGGAAGCCTCTGCCTGCTAGATCTTCCAATTTTGGTTCTGGTTTTCGTGATTCCGGGCTGGAGCCTGATCGCTGGACGAGGGGTACACCACTGCTGCAGCGCGAGGAGAGGGAGGGGGAGCGAGAGCGGCCAAGGTTGGTATTGGATCCACGGAAAAGTGGCGATGGTTCTGTGAATGAAGCTCCAGTGAAGACGAATAAGTCAAATCCATTTGGTGTGGCAAGGCCGAGGGAGGAGGTTTTAGCTGAAAAGGGATTGGATTGGAAGAAGCTGGATTCGGAGCTTGCAGCAAAGAAGCCGTTGAGTCGCCCCACAAGTTCACACTCAAGCAGGCCTTCTAGTGCTCAATCTGGTCGCTCTGAGGGTCCTGGATTGTTGGGTGCAGAAACTGTGGTGAAACCGAGACCCAAGGTTAACCCCTTTGGGGATGCCAAACCTAGGGAGGTGTTGCTGGTGGAGCGAGGTATGGATTGGAGGAAGATTGATCTTGAATTGGAGCATCGCTGTGTTGAGAGGCCTGAGACTGAGGAGGAAAAAATATTAAAAGAAGAAATTGATCAATTGAAGAAGGAACTTGAGAAAGAGTCCACAGCAAATTTGAACAAGGAATTTGTGGGTGAGTCCGGTGAAGAGCAAAGTAGTGCAAGTGCAATCTTACTACATAAAGAAAGGGAGCTGGAACTTCTTATTCATGACTTCGATGACAAAGTTCGTTTTGGTCAGAAAGCTGTTGAAAGGCCAGGTTCCTCATCAGGAAGGAGTGTTGGTCTTCCTGATAGGCCACATTCTCAATCTGGCTTATATGAGGATTCTAAAAGTGTGGAGTTTAATGACAGGCCTCGATCCCGTGGCACAGGAGATATGCGGATGCGTCCTAGTGATGAAAGAAGACCATATAATGGTGGCAGGGACAGGGGGGAGTTTCTAGGTAGCAGGGACTTTAATAGATCAGGGTCAAGGGAGAGATGGGAAAAGCACAAACTGAAGGAAATCAAACAAAAACAGCAGCACGGGCGGTGA 1734 0.5156 MSKAWGNIGAWAADSERAEAEEREAEVVVQTAGSQNFPSLKEAVNAKQPKKKKMTLSEFTKLAAGGSGGGSSEYRGLTPDEMLRLPTGPKERSAEEMQFSRGGFSSYGRSGGPSRDRDDNRDGSWGGGRRSYGGFDEEPRRGNNSRVLELDQPSRADEVDNWASVRKPLPSFDSGRQNRYGSNGGGPRGDGSFGGSPRGGGGFGGDPRGDGGFSGGPRGDVGFGGGSRADGVDNWAVGRKPLPARSSNFGSGFRDSGLEPDRWTRGTPLLQREEREGERERPRLVLDPRKSGDGSVNEAPVKTNKSNPFGVARPREEVLAEKGLDWKKLDSELAAKKPLSRPTSSHSSRPSSAQSGRSEGPGLLGAETVVKPRPKVNPFGDAKPREVLLVERGMDWRKIDLELEHRCVERPETEEEKILKEEIDQLKKELEKESTANLNKEFVGESGEEQSSASAILLHKERELELLIHDFDDKVRFGQKAVERPGSSSGRSVGLPDRPHSQSGLYEDSKSVEFNDRPRSRGTGDMRMRPSDERRPYNGGRDRGEFLGSRDFNRSGSRERWEKHKLKEIKQKQQHGR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0601 577 MobiDBLite consensus disorder prediction 338 358 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 479 577 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 333 381 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 258 288 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 133 162 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 39 316 - -
Lan12g0601 577 Coils Coil 413 436 - -
Lan12g0601 577 MobiDBLite consensus disorder prediction 510 577 - -
Lan12g0601 577 Pfam Plant specific eukaryotic initiation factor 4B 1 544 IPR010433 GO:0003743
Lan12g0601 577 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 561 IPR010433 GO:0003743
Lan12g0601 577 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0601 Lan-Chr12 12836762 12854849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0601 1 561 Eukaryotic Initiation Factors Gene Family AT3G26400 52.137 1.27e-138 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0601 - - gmx:100784238 587.8