Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0600 ATGGGAGTCTTCACCTTCGTTCTCCGCAACTCCGGTGGCAAATGGACCGCCAAGCAACACTCCGGTGACATCGAGGCCTCCGCTTCCTCCACCTTCGAGCTCCAACGGCTGCTCGTTAACGCCGCTCTCGCCGTTGATTCCTCCGGCGGCGTTCAGTCCTCTTTCTCTACCGTTTCACCTACCTCTGCTGTCTTCCAGGTGATTGTGGGCGGTGCTGTGGCTGTTGGAGGTGGTGTTGCAGCAGCTGCATCAGCAGGTGCCGCCCCTGCTGCCGAGGCTGCTGCTCCTGCCAAGAAAGAAGAAAAGGTTGAGGAAGAGGAAGATGAAGAAGAATTTGGATTGTCCCTCTTTGATTAA 357 0.5658 MGVFTFVLRNSGGKWTAKQHSGDIEASASSTFELQRLLVNAALAVDSSGGVQSSFSTVSPTSAVFQVIVGGAVAVGGGVAAAASAGAAPAAEAAAPAKKEEKVEEEEDEEEFGLSLFD* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0600 118 Pfam 60s Acidic ribosomal protein 63 117 - -
Lan12g0600 118 MobiDBLite consensus disorder prediction 103 118 - -
Lan12g0600 118 MobiDBLite consensus disorder prediction 92 118 - -
Lan12g0600 118 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 118 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0600 Lan-Chr12 12833315 12834613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0600 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 75.362 4.33e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0600 K02942 - gmx:100804776 114.005