Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0582 ATGTTAGAGAACAGTGGTGTACGTGATTCTGAACTGAGTGTTGAAACTGCAAACTCAACGCAGGACCGAAGCTCCATGAGCACCGATATCGACAGCATTTGCAGCACCAGCTTCACCCGTCTTTCCTTCGACCTCTTCCCCACTCCACCGTCGCCGGAGAGTGGTAGTAGTGTCTCTCTGAAACCTCACCGTTCCTCCGACTTCGTCAACTCCGCTACCTTCCGTCGCCGATGCAGCAAACTCACCTTCCGCGACTTCCATCTCCTCCGCCGCATCGGTCAAGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAACACCTTAGATGAAGAAGATGATGTGAGTAACCGCTTATACGCTATGAAGGTGGTGGACAAAAACGCCATCGCAATGAAGAAGAAAGCACAACGAGCAGAAACAGAGAGAAAGATTCTAAAGATGCTCGATCACCCTTTCCTACCTACGCTCTACGCTGAACTTGACGCCTCTAATTTCTCTTGCATTGTAATGGAGTTTTGTTCCGGTGGAGACCTCCATTCTCTGCGCCACAAACACCCTCACAACCGCTTCTCCCTAACCACCGCAAGATTTTATGCTGCCGAGGTATTATTGGCGTTGGAGTACCTTCACATGTTGGGAATCATTTATAGAGATCTAAAGCCAGAGAACGTGTTAGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTTTCTTTCTGTTCAGATTCAATCCCAACCGTTCAATCTTCTGATTGCTTTCAAGATACACCTGCGTTACCCTACACTCGCCCACTTATTAACCCTTTCTCCTGCTTTTCCAACAAGGCTTTCCGCTCCCGCAAAGTTCAAACGGTTCAACCGGACCGGTTATTTGTCGCTGAACCGGTCGATGCTCGTTCATGCTCTTTCGTTGGGACACATGAATATGTCTCGCCGGAAGTTGCCGCAGGTGGGTCCCACGGCAATGCCGTGGATTGGTGGTCATTCGGTGTATTTATCTACGAGCTAATATACGGTCGTACACCGTTTGCGGCTCCATCGAACGAAGCTACGCTTAGAAACATTGTGAAGAAGCCTCTGACGTTCCCAACTGCCACGCCCTCGTCCGCGCTTGAGAGACACGCGCGGGACTTGATATCTCTGTTGCTTAACAAGGAGCCAGCTCAACGGCTAGGATCAAAGCGCGGCGCGGCTGAGGTGAAGAAGCACCCGTTTTTCAAGGGGATCAACATGGCGCTGATTCGCACGGTGACGCCGCCGGATGTGCCTGGCTTGAGAAGACGTAAAACGACGCCGTTGTGTAATGCAGAGGGTTTTGAAAGTAGTAGTATTAGAAAATTGACGTCAACGACGTCGTTTGATTATTACTTTTGA 1383 0.5033 MLENSGVRDSELSVETANSTQDRSSMSTDIDSICSTSFTRLSFDLFPTPPSPESGSSVSLKPHRSSDFVNSATFRRRCSKLTFRDFHLLRRIGQGDIGTVYLCRLRNTLDEEDDVSNRLYAMKVVDKNAIAMKKKAQRAETERKILKMLDHPFLPTLYAELDASNFSCIVMEFCSGGDLHSLRHKHPHNRFSLTTARFYAAEVLLALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSFCSDSIPTVQSSDCFQDTPALPYTRPLINPFSCFSNKAFRSRKVQTVQPDRLFVAEPVDARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPFAAPSNEATLRNIVKKPLTFPTATPSSALERHARDLISLLLNKEPAQRLGSKRGAAEVKKHPFFKGINMALIRTVTPPDVPGLRRRKTTPLCNAEGFESSSIRKLTSTTSFDYYF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0582 460 SUPERFAMILY Protein kinase-like (PK-like) 66 445 IPR011009 -
Lan12g0582 460 Gene3D Transferase(Phosphotransferase) domain 1 174 241 - -
Lan12g0582 460 Gene3D Phosphorylase Kinase; domain 1 84 173 - -
Lan12g0582 460 Pfam Protein kinase domain 304 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0582 460 Pfam Protein kinase domain 86 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0582 460 MobiDBLite consensus disorder prediction 1 28 - -
Lan12g0582 460 Gene3D Transferase(Phosphotransferase) domain 1 300 427 - -
Lan12g0582 460 SMART serkin_6 86 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0582 460 ProSiteProfiles Protein kinase domain profile. 86 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0582 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lan12g0582 460 CDD STKc_phototropin_like 84 432 - -
Lan12g0582 460 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 4 460 - -
Lan12g0582 460 PANTHER FLIPPASE KINASE 1-RELATED 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0582 Lan-Chr12 12572925 12574836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0582 9 459 AGC Kinase Gene Family AT2G34650 63.797 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan12g0582 Pkinase 3.7e-34 CL0016