Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0567 ATGGGTAAGGGTCCTTTTTCCTTTCGCCGTTCATCCCCACGCCGCCGCACCAAGAAGCCACCGTCGCAGTCTCCGCTGGCAACGCCGCCTCCCGCGATTTCCGGTTCCTCATTCGAAAACGGTGGCGGCGGTGCGGTGACGAAGGCGAAGAAGAAGACCGGCGGAGCGAGGTTGTGGATGCGGGTTGATCGGACGGGAAGATCGGAGCTGGTGGAGTGGGACAAGAATATGATCATCCGTCATGCTGCGATTCCTGCTAGGGATTTGAGGATTTTGGGCCCTGTCTTCTCTCACTCCTCTAATATCCTCGCCAGAGAGAGAGCAATGGTAGTTAATTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGAAGTGCTATTGCTTGATCCTCTTCGCCAGGAGGTTCTTCCATTCGTTGAACAACTCAGGCAACAACTTCCATATAAAAATCAACCTAAGCTTCATGGACCTGCAGATGAACAAGAAAATGATATGCAGGTTTCTATTGGTAGACAATGGTTACCTGCACCAGAATCCGCTGAAGGTTTGCAAGCTGAGCTTCCATTTGAGTTTCGAGTTTTGGAGATTGCTTTAGAAGTTGTCTGTACTTTTCTGGATTCAAGTGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTACTAGATGAATTGGCTAGGAACGTTAGCACCAAGAATCTTGAACATGTGCGAAGTTTGAAGAGCAACCTTACACGTTTGCTGGCACGTGTGCAAAAGGTCCGGGATGAAATTGAACATCTGTTAGATGACAATGAAGATATGGCACAGTTATATTTGACCAGGAAGTGGTTGCAGAATCAGCAATTTGAGGCCCATTCTGGAGCCACAGTCTCAAATAACCTTTCTAACCTTCGCCGATTAGGTTCTACCAGAAGTGGAAGTCTTGTGACTAGCAATGATGATAATGATGTGGAGGAACTGGAGATGTTGCTTGAAGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATACTGTCTGTTAGAGAGTATATTGATGATACAGAAGACTATGTCAACATCCAACTTGATAACCATAGAAACGAACTTATTCAGCTGCAGTTGACACTGACCATTGCATCATTCGCCATTGCTGTTGAAACTTTGATTGCTGGTGCTTTCGGTATGAACATTCCATGTGAATTATATGAAACAAAAAATTTATTCTGGCCCTTTGTTGGGAGCATATCTGCAGGTTGCATATTCCTTTTCCTGATTATTTGGTCATATGCAAAATGGAAAAAGTTGCTGGGATCTTAA 1296 0.4506 MGKGPFSFRRSSPRRRTKKPPSQSPLATPPPAISGSSFENGGGGAVTKAKKKTGGARLWMRVDRTGRSELVEWDKNMIIRHAAIPARDLRILGPVFSHSSNILARERAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPYKNQPKLHGPADEQENDMQVSIGRQWLPAPESAEGLQAELPFEFRVLEIALEVVCTFLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEAHSGATVSNNLSNLRRLGSTRSGSLVTSNDDNDVEELEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIAGAFGMNIPCELYETKNLFWPFVGSISAGCIFLFLIIWSYAKWKKLLGS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0567 431 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 431 - -
Lan12g0567 431 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 367 420 IPR045863 -
Lan12g0567 431 CDD Mrs2_Mfm1p-like 59 428 IPR039204 -
Lan12g0567 431 Pfam CorA-like Mg2+ transporter protein 238 422 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lan12g0567 431 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 431 IPR039204 -
Lan12g0567 431 Gene3D Magnesium transport protein CorA, transmembrane region 369 427 - -
Lan12g0567 431 Coils Coil 235 269 - -
Lan12g0567 431 MobiDBLite consensus disorder prediction 1 50 - -
Lan12g0567 431 Gene3D - 45 130 - -
Lan12g0567 431 Gene3D Magnesium transport protein CorA, transmembrane region 131 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0567 Lan-Chr12 12439344 12443692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0567 1 431 MRS2 Gene Family AT3G58970 68.090 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0567 K16075 - gmx:100812561 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0567 12 12439344 12443692 Lan1g1792 1 32622835 32627955 LSH
Lan12g0567 12 12439344 12443692 Lan15g0041 15 256749 259240 PCT
Lan12g0567 12 12439344 12443692 Lan14g0215 14 2485848 2488307 PCT