Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0566 ATGGCAAATTCAAAGGGCTCATCAGGTGTCAGAAATTTCATGTACAATGGAAAACATCCTCTTCTTCCTCCTAAAAGTCCATTTCCGAGTGTTTCGCAACCATATGCTGATTCTGCAGTTGGTTCAAAAGCCTTTCAGAATCGTAGAGAGGGAAATACACACCACCAACGTACTTCATCTGAGAGCCATGTTATGGAGGAGCAACCCTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTGCGAAGGGGTGGTCATCGGCGTTCGTCAAGTGATTCTTCTTTTGCATACTTAGATACAGTTAATGCGACTAATATCAATTATGCTGGTCAGAATTTGCTATCTGTTCCATCTTGGTCATCTCAAGAATTTGGTCATGGCAAAGACGGTCATCATATACCCACGTATGCAGAAATGAATGCAACAAAACAGAGAAATAGATCATGGGACTCTTTTTCAAATGCCATGACTCATCCAGGTGTTTCTCCCTCTAGCAAAGAAAATGTTGTTTTGAAGAGTTCAGGATCACCATATGCACCACATGAAGCAGATGGGCTTCCATCAACTGCAAATGAAAAGTACGACTCACTAGAACCTGGCATACAGGATACAAAATCATCTTCTGAACGAAAGGATGGTTCACATGCGAAGTCATCTGCTTCTGAGACAGATACAAAACGTGCTAAACAGCAATTTGCCCAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTCCAAGCTTTGCAGGCAGAAGGGTCTGAAGTGTCAGCTGAACTAGAATTTCTTAACCAGCAAAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGCTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAACAGGAAGTACTGGAAAGAGAGATTGGAAGATTGCGCGCATTGTTTCAGCAGCAGCAAACACTTAAGCCGCAACAACCATCAGCTAGTCATAGGCGCACCAACAGCAGAGACCTTGAATCTCAGTTTGCAAACATTTCTCTAAAGCACAAGGACACCAATTCAGGCCATGACCCTGCCACTGGAGCACTCAGAATTTAG 1101 0.4305 MANSKGSSGVRNFMYNGKHPLLPPKSPFPSVSQPYADSAVGSKAFQNRREGNTHHQRTSSESHVMEEQPSWLDDLLNEPETPVRRGGHRRSSSDSSFAYLDTVNATNINYAGQNLLSVPSWSSQEFGHGKDGHHIPTYAEMNATKQRNRSWDSFSNAMTHPGVSPSSKENVVLKSSGSPYAPHEADGLPSTANEKYDSLEPGIQDTKSSSERKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRALFQQQQTLKPQQPSASHRRTNSRDLESQFANISLKHKDTNSGHDPATGALRI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0566 366 Coils Coil 239 294 - -
Lan12g0566 366 MobiDBLite consensus disorder prediction 1 69 - -
Lan12g0566 366 Gene3D - 228 280 - -
Lan12g0566 366 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 354 IPR044797 -
Lan12g0566 366 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 354 - -
Lan12g0566 366 MobiDBLite consensus disorder prediction 48 62 - -
Lan12g0566 366 MobiDBLite consensus disorder prediction 346 366 - -
Lan12g0566 366 CDD bZIP_plant_RF2 226 274 IPR044759 GO:0003700|GO:0006355
Lan12g0566 366 MobiDBLite consensus disorder prediction 153 235 - -
Lan12g0566 366 SMART brlzneu 224 283 IPR004827 GO:0003700|GO:0006355
Lan12g0566 366 SUPERFAMILY Leucine zipper domain 235 277 IPR046347 GO:0003700|GO:0006355
Lan12g0566 366 MobiDBLite consensus disorder prediction 153 174 - -
Lan12g0566 366 MobiDBLite consensus disorder prediction 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0566 Lan-Chr12 12429258 12434793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0566 204 298 bZIP Transcription Factor Family AT3G58120 46.392 2.57e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0566 - - gmx:100813098 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0566 12 12429258 12434793 Lan1g1791 1 32604026 32608808 LSH
Lan12g0566 12 12429258 12434793 Lan1g0490 1 5570807 5575153 LSH