Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0529 ATGGGAAACAAAGATGTGAAGGTGGTGAGCTTTTGGGTGAGTCCATTTGTTAAAAGGGTCGAGTGGGCTCTAAAACTCAAAGGTGTTGATTATGAGTATATAGAAGAAGATATTTACAACAAGAGTCCTCTTCTTCTGGAACTAAACTCAGTTACAAAGAAGGTTCCTGTTCTTGTTCATAACCACAAACCAATAGTTGAGTCATTCATTATCCTTGAATACATTGATGAAACATGGAACCAATATCCATTGCTTCCTCATCATCCTCATGAAAGAGCTCTTGCACGATTTTGGGCTAATTTTGCCGAACGAAAGCTTTTAGACATTGCATGGGTTGCAATGTGTAGCAGCGGGAATGAACAGGAAAAAGCTGTAAATATAGCAAGAGAAGCAATGGAGAAAATAGAAGAAGAGATAAAGGGAAAGAAATTCTTTGGAGGTGAATATATTGGATTCCTTGACATTGCACTTGGATGGATCTCTTACTGGCTTCCTGTTTTCGAGGAAGTTGGATCTATGCAGATAATAGATTCATCAAAACATTCAGCCACCATTGCATGGATGAACAATTTTCTTAGCCACCCTGTGATTAAAGAGAGCTTGCCCCCAAGAGACAAAACGCTTGCTTATTTTCACACTAGGAGAAAGGCATTGTTATCAACTTTTCAAGGCTTCTTCAAGGATTAA 687 0.3872 MGNKDVKVVSFWVSPFVKRVEWALKLKGVDYEYIEEDIYNKSPLLLELNSVTKKVPVLVHNHKPIVESFIILEYIDETWNQYPLLPHHPHERALARFWANFAERKLLDIAWVAMCSSGNEQEKAVNIAREAMEKIEEEIKGKKFFGGEYIGFLDIALGWISYWLPVFEEVGSMQIIDSSKHSATIAWMNNFLSHPVIKESLPPRDKTLAYFHTRRKALLSTFQGFFKD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0529 228 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Lan12g0529 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Lan12g0529 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lan12g0529 228 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Lan12g0529 228 Coils Coil 118 138 - -
Lan12g0529 228 PANTHER GLUTATHIONE S-TRANSFERASE 1 219 - -
Lan12g0529 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
Lan12g0529 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Lan12g0529 228 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Lan12g0529 228 Gene3D Glutaredoxin 1 84 - -
Lan12g0529 228 CDD GST_N_Tau 6 79 - -
Lan12g0529 228 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Lan12g0529 228 Gene3D - 85 221 - -
Lan12g0529 228 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0529 Lan-Chr12 12034533 12036089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0529 2 218 Glutathione S-transferase Gene Family AT2G29420 43.318 3.51e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0529 K00799 - gmx:547583 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0529 12 12034533 12036089 Lan1g1763 1 32210237 32211885 LSH