Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0525 ATGAATGAACAAGAATATAGTGACCTAGGAGGCCAAGAAAACTTTGCAGAGTCTCCCTCTTCTTCCATCGTCTATAACTTGGGTGGCATGGTTACTTCTCCATCCACTTCTTCCTCTTCACTGAAGAAAAGCCGGCGAGGTAAGCAGAAAAGGGTTGTACAAATTCCAATAAAAGAAACAGAGGGTTCAATCAGCAACACTCCACCCTCGGATTCATGGGCATGGCGAAAGTACGGCCAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGATACTACAGGTGTAGCAGTAACAAAGGATGTCCGGCAAGGAAACAAGTGGAGAGGAGCCGCATGGACCCCACAATGCTCGTGGTTACTTACTCTTCCGAACACAACCATGCCTTACCAGTTTTCAAAAACCATCACCACCATAATCACAATCACAGCAACAACAACAACCACTCTTCTTCCGCGGCTGCAAAACCCATCATCAAACCAGAACCGGACCGGATAATTGCGGAGCCGGTCGAACCGGATGATAAGTTTGCAGACGAATTCGGGTGGTTCGGCGGGATGGAGACTATTGTAACGACGTCGTCTACCGTTCTTGAGGGTCCAATATTTGGTGGGTACGATGATGATGTAGCATCGGTGTTCATGCCTATGAGGGAGGAGGACGAGTTGCTGTTCGCTGACCTTGAGGAACTGCCGGAGTTCTCTCCGGTATTCAAGCGAGGGTCACTAGAGACAGCGGAGGAGTGGCCGCGGTGGTGTTGGACCACAAGCTAA 771 0.4968 MNEQEYSDLGGQENFAESPSSSIVYNLGGMVTSPSTSSSSLKKSRRGKQKRVVQIPIKETEGSISNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSNKGCPARKQVERSRMDPTMLVVTYSSEHNHALPVFKNHHHHNHNHSNNNNHSSSAAAKPIIKPEPDRIIAEPVEPDDKFADEFGWFGGMETIVTTSSTVLEGPIFGGYDDDVASVFMPMREEDELLFADLEELPEFSPVFKRGSLETAEEWPRWCWTTS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0525 256 MobiDBLite consensus disorder prediction 1 72 - -
Lan12g0525 256 SUPERFAMILY WRKY DNA-binding domain 66 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0525 256 MobiDBLite consensus disorder prediction 1 42 - -
Lan12g0525 256 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0525 256 PANTHER OS01G0750100 PROTEIN 15 248 - -
Lan12g0525 256 ProSiteProfiles WRKY domain profile. 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0525 256 MobiDBLite consensus disorder prediction 134 153 - -
Lan12g0525 256 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0525 256 Gene3D WRKY domain 57 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0525 256 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 248 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0525 Lan-Chr12 12003647 12006628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0525 12 241 WRKY Transcription Factor Family AT1G29280 51.037 2.42e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan12g0525 WRKY 9.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0525 - - lang:109348688 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0525 12 12003647 12006628 Lan1g0533 1 6455618 6458107 LSH