Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0524 ATGGGTTGCAGAGTGCAGAAAAAGATATCAATGCGTAGAAAACTTCACATTCTGAGAGCCCTTGCCAACTCCAACTCTGCTAAGAGAACCACCATTGAAAAGAGTACTATTCTATACATATACAAGTTAAAGGTGGCCATGGAAACTGTCAAAAGAGAGTATGAAAACCTACTAGCCATCAGAAGCCAGTACCTTAACCTATTGAACCATGTCCAAGAGAACAAGAATGTGAAAGTAGAGAAGATAAACACTGGAACCTTTGTGGTGAGTGTGACCTGCGACAAACGAGGTGACAAGCTGGTTGCTATTTTAGAGGCTTTTGATGAGATGGGTCTGAATGTTGAACAAGCAAAAGTTTCATGTGAAAATGGCTTTTCTCTGGAAGCCATTGTTGTGGCTGAGGATAAAAAACTGGATGTGAGAGATGTTACTGAAGCACTTCTAAAAGCTATTGGAAAAGAAAGTGGTCAAAAGGACTCAACATAA 486 0.4012 MGCRVQKKISMRRKLHILRALANSNSAKRTTIEKSTILYIYKLKVAMETVKREYENLLAIRSQYLNLLNHVQENKNVKVEKINTGTFVVSVTCDKRGDKLVAILEAFDEMGLNVEQAKVSCENGFSLEAIVVAEDKKLDVRDVTEALLKAIGKESGQKDST* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0524 161 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 158 - -
Lan12g0524 161 ProSiteProfiles ACT domain profile. 88 161 IPR002912 -
Lan12g0524 161 PANTHER TRANSCRIPTION FACTOR BHLH35-LIKE PROTEIN 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0524 Lan-Chr12 11989064 11990425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0524 89 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 40.476 3.93e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0524 - - gmx:100793239 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0524 12 11989064 11990425 Lan1g0534 1 6543241 6545016 LSH