Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0517 ATGGCTACAACCACAACCATCAAATCACTTAAAAAGAAAGAAACCACTAACCTTCTCTTAGGCCGTTTCGAAGTAGGAAAACTCTTAGGCCATGGAACCTTTGCCAAGGTTCACCTTGCACGTAATATCAAAACTGGTGATTGTGTAGCCATCAAGATCATTGATAAGGAGAAGATCCTTAAGGGTGGCCTTGTGGGTCATATCAAACGTGAGATCACTATTCTCCGCCGTGTCCGCCACCCTAATATTGTTCAACTATTTGAAGTTATGGCCACCAAAACAAAGATCTACTTCATCATGGAGTATGTTCGTGGCGGTGAACTCTTTAACAAGGTTGCTAAAGGTAGGTTGAAGGAAGAAGTTGCAAGGAAATACTTCCAACAATTGGTTTCAGCGGTAGGGTTTTGCCATGCTAGAGGTGTGTTCCATAGGGACATAAAACCAGAGAATTTGTTGCTTGACGAAAATGGTAACCTTAAAGTTTCAGATTTTGGTCTCAGTGCTGTGTCCGATCAAATAAGGCAAGATGGGTTGTTCCACACGTTTTGTGGGACACCTGCATATGTAGCACCTGAGGTTTTGGGTAGGAAAGGTTATGATGCTGCAAAGGTTGATATTTGGTCATGTGGTGTTGTTCTATTTGTTCTTATGGCTGGTTATTTACCCTTTCAAGATCAAAATGTTATGGCTATGTACAAAAAGATTTACAAGGGTGTGTTCAGGTGTCCAAGATGGTTCACACCCGAACTCACAAAACTACTAACTAGGCTTCTTGATACAAACCCACAAACCAGGATTTCAATACCTGAGATCATGGAGAATAAGTGGTTCAAGAAAGGGTTCAAGGAGATCAAGTTCTATGTTGAGGATGATGTAGTTTGTAATCTTGATCATGAGAAGCTGATGGGAAGTGATGAAGAAGATGAAGGATCGGTTTCGGAGTCCGATTTCGAGGTTGTAACTAGAAGGAGGAGTAAGAATGCTTCATTACCAAGACCTGCAAGTTTGAATGCATTTGATATTATATCATTTTCACCAGGTTTTGATCTTTCTGGTTTGTTTGAGGAAAAGGGTGATGAGGCAAGGTTTGTGTCTCGTGCTCCAGTTTCTAAGATCATATCAAAATTAGAGGAAGTTGCTCATTTGGTTAGTTTCACAGTGAGGAAAAAGGATTGCAGGGTGAGTTTGGAAGGTTCAAGAGAAGGTGTGAAAGGACCATTGACTATTGCTGCAGAAGTATTTGAGTTAACACCTTCTTTGGTTGTGGTAGAAGTGAAGAAAAAAGGAGGGGATAGAGAAGAATATGATAAATTTTGTAACACTGAATTGAAACCTGCTTTGGAGAATTTGACAATGGAGGAAGAATCTGCAAGTTCTTCTTCATATTCACATACTCCCACTGAATCTGTTCAACAACGTGCTCTTTCTGACTCTGCACTTGACATGCCTTCAGATACTGAATCTTTGTTCTAA 1473 0.4039 MATTTTIKSLKKKETTNLLLGRFEVGKLLGHGTFAKVHLARNIKTGDCVAIKIIDKEKILKGGLVGHIKREITILRRVRHPNIVQLFEVMATKTKIYFIMEYVRGGELFNKVAKGRLKEEVARKYFQQLVSAVGFCHARGVFHRDIKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDAAKVDIWSCGVVLFVLMAGYLPFQDQNVMAMYKKIYKGVFRCPRWFTPELTKLLTRLLDTNPQTRISIPEIMENKWFKKGFKEIKFYVEDDVVCNLDHEKLMGSDEEDEGSVSESDFEVVTRRRSKNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSRAPVSKIISKLEEVAHLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTPSLVVVEVKKKGGDREEYDKFCNTELKPALENLTMEEESASSSSYSHTPTESVQQRALSDSALDMPSDTESLF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0517 490 CDD CIPK_C 337 447 - -
Lan12g0517 490 PANTHER - 6 464 - -
Lan12g0517 490 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0517 490 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 6 464 - -
Lan12g0517 490 ProSiteProfiles NAF domain profile. 331 355 IPR018451 GO:0007165
Lan12g0517 490 Gene3D Kinase associated domain 1, KA1 333 452 - -
Lan12g0517 490 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0517 490 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lan12g0517 490 Pfam NAF domain 333 389 IPR004041 GO:0007165
Lan12g0517 490 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0517 490 SUPERFAMILY Protein kinase-like (PK-like) 19 304 IPR011009 -
Lan12g0517 490 MobiDBLite consensus disorder prediction 451 490 - -
Lan12g0517 490 MobiDBLite consensus disorder prediction 452 490 - -
Lan12g0517 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lan12g0517 490 Gene3D Transferase(Phosphotransferase) domain 1 13 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0517 Lan-Chr12 11849186 11851451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0517 1 487 CBL-interacting serine-threonine protein kinases AT4G18700 73.737 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan12g0517 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0517 - - lang:109348755 818.535