Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0515 ATGGAAAGAAATCGGGACCCTTTTGGATTATGGATCAGAATTTGTTTTGGATTGGTCTCTTTGTTGGGAATTCAGCAGTGTTGGTCTCTGAATGATGAAGGATTGAGTTTGTTGGAATTTCGGGTCAGAATAACTGCTGATCCTCATGCTTCTCTGGCAAATTGGAATCCAAATGATTCCAACCCTTGCAAGTGGTTGGGTGTTCGTTGTGTTGATGGTAAAGTGCAAATGCTGGATCTGAATGGACTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTCAGTCACTTAAGATCTCTTGTCGTATGCAAGAACAAATTTTCTGGCACCATTCCCAAAGAAATTGGAGATCTGGGCAAGCTGGAGTTACTAGATTTAAGGGAGAATAACCTGACTGGAAGTATTCCAGCAGAAATTGGCAGGATGTTGCCGTTAAAACGATTGTTGGTTTGTGACAATAAAATTGAAGACATTGATTCTGAAGAACTTGAAAAGCTCAGATTGCCATCTAAATTGCTATTTTTTGACAACTGCTCACCAACTTTTTTCGGCTGCATGAATAGAAAGTTTGGACATTGCGTGTGGCATAGTGATTATTCCAGACAATGGAACAAGGCGGATTCATTGTTTATTCCAATTAAAGGAGCACTTATAAAATACCTCAATGTCTTGGCACTTCCACTGTTCAAGCTACAGAAGGCCTCCTTTCATGATTATGAAGAGAATTACTGTAGCAATCTGCCTCGTTCTGAGGAGCTAGAGATTGTCCAGAATGTATCAAATCTAGTAAATTCTGCACGACGTAAGTTACTAGATCAGTCCAGTAACCTCGCAGCTGCACCTTACAGTGGTGGGCCTACTATACAGATCAGTTCTCTTCCAATTACCCTGAGTAGTGGATCTTTCTCGGCTGTGCCAGATGCCAATAAGAAACAAAATCAGTCACCTGCACCTCCTACTTCACCTTCCGATTTTCCACATGATACTTTGAATAAAACAAGTGAACAACATGGAGGAAATGGTGCTTCTAGAAAATGGTGGAAGTATCTTATTATTATTTTAGTCGTTGCCCTCCTGGTCATTGCTATTATGATCCTGCTTTTTGTTTGGCGTAAACGAGCAGCAAAAGTAATAAAGCCCTGGACGACAGGACTAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCGAAGCTGAATCGAGGTGAGCTTGAGACAGCCTGTGAAGATTTCAGCAATATCATTTCGAGCTATAATGAGTTCACAATATACAAAGGAACATTGTCCAGCGGAGTCGAGATTGCTGTTGTTTCTACTGCTATTACTTCTTCCAAAGATTGGCCAAAGAATATGCAGACGGCCTATCGGAAGAAGATTGATAGCTTGTCTCGTATTAACCATAAGAATTTTGTCAATCTTATTGGGTACTGTGACGAAGAAGAACCATTCACAAAGATGATGGTGTTTGAGTATGCTCCAAATGGATCCATATTCGAGCATCTGCATGCTAAGGAAGTTGAGCATCATCTTGATTGGAGTGCAAGGATGAGGATTATTATGGGCACGGCTTATTCTCTCGAGTACATGCACGACCGGGAACCACCAGTATCTCATACCAACCTTAGCTCACTTTATATATTATTAACTGATGACTATGCTGCTAAGATTGGAGAAATGACTTTTGGCCAATGTCTAATAACACCATCCAACAGAAAAGGAGATCCATCAAAGAAATGTGAGTTGCCACCCCACTGTGATCCTGAAACCAATGTCTACGACTTCGGAATATTGTTGCTTGAAATCATTTCTGGGAGACTACCTTATTCTGAAGAACAAGGCACCCTTGTGAACTGGGCTACTGAGTACTTGAATGATAAACAAACTATCGGCAATATGGTCGATCCGACACTTGAATCCTTCAAAAACAATGAACTTGATGTGCTATGTGAGGTGATCCAAGATTGCATTCAACCTGATCCAAGGCTAAGACCATCAATGAAGGACATAACTCCCAAACTAAGGGAAGTGCTTCAAGTATCTCCCGAACAAGCTGTTCCACGGCTCTCTCCGCTCTGGTGGGCTGAACTGGAGATCTTGTCAGGGGAGGCCACTTAA 2124 0.4181 MERNRDPFGLWIRICFGLVSLLGIQQCWSLNDEGLSLLEFRVRITADPHASLANWNPNDSNPCKWLGVRCVDGKVQMLDLNGLSLEGTLAPELGKLSHLRSLVVCKNKFSGTIPKEIGDLGKLELLDLRENNLTGSIPAEIGRMLPLKRLLVCDNKIEDIDSEELEKLRLPSKLLFFDNCSPTFFGCMNRKFGHCVWHSDYSRQWNKADSLFIPIKGALIKYLNVLALPLFKLQKASFHDYEENYCSNLPRSEELEIVQNVSNLVNSARRKLLDQSSNLAAAPYSGGPTIQISSLPITLSSGSFSAVPDANKKQNQSPAPPTSPSDFPHDTLNKTSEQHGGNGASRKWWKYLIIILVVALLVIAIMILLFVWRKRAAKVIKPWTTGLSGQLQKAFITGVPKLNRGELETACEDFSNIISSYNEFTIYKGTLSSGVEIAVVSTAITSSKDWPKNMQTAYRKKIDSLSRINHKNFVNLIGYCDEEEPFTKMMVFEYAPNGSIFEHLHAKEVEHHLDWSARMRIIMGTAYSLEYMHDREPPVSHTNLSSLYILLTDDYAAKIGEMTFGQCLITPSNRKGDPSKKCELPPHCDPETNVYDFGILLLEIISGRLPYSEEQGTLVNWATEYLNDKQTIGNMVDPTLESFKNNELDVLCEVIQDCIQPDPRLRPSMKDITPKLREVLQVSPEQAVPRLSPLWWAELEILSGEAT* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0515 707 Gene3D Ribonuclease Inhibitor 29 203 IPR032675 -
Lan12g0515 707 SUPERFAMILY Protein kinase-like (PK-like) 406 673 IPR011009 -
Lan12g0515 707 SUPERFAMILY L domain-like 38 222 - -
Lan12g0515 707 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan12g0515 707 MobiDBLite consensus disorder prediction 307 343 - -
Lan12g0515 707 PANTHER PROTEIN MALE DISCOVERER 2 1 707 - -
Lan12g0515 707 Gene3D Phosphorylase Kinase; domain 1 385 494 - -
Lan12g0515 707 Pfam Protein tyrosine and serine/threonine kinase 426 676 IPR001245 GO:0004672|GO:0006468
Lan12g0515 707 Gene3D Transferase(Phosphotransferase) domain 1 495 689 - -
Lan12g0515 707 MobiDBLite consensus disorder prediction 307 342 - -
Lan12g0515 707 PANTHER LRR RECEPTOR-LIKE KINASE 1 707 - -
Lan12g0515 707 ProSiteProfiles Protein kinase domain profile. 293 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0515 Lan-Chr12 11832594 11839528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0515 78 687 Receptor kinase-like Gene Family AT5G56040 24.308 1.20e-39 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan12g0515 PK_Tyr_Ser-Thr 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0515 - - gmx:100808098 950.273