Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0508 ATGGCCTCCACCAAAGAACGTGAAACCTTCGTCAACACCGCCAAGCTCGCTGAACAAGCTGAGCGCTATGAAGAAATGGTGGAAGCTATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAGAGGAACCTTCTATCTGTTGGGTACAAGAATGTGGTGGGTGCTCGTAGAGCATCATGGAGGATCCTTTCCTCCATTGAGCAAAAGGAAGAAACTAAAGGAAATGATCTGAATGTGAAGAGAATCAAGGAGTATAGGCAAAAGGTGGAATCTGAGTTGGACAAAATCTGTAGTGATATCATGACTGTTATTGATGAGCACCTTATTCCCTCTAGTCCTGGTGGTGAACCTAGTGTGTTTTTCTACAAAATGAAAGGGGACTATTATCGGTATCTGGCGGAATTCAAGCCTGGTGATGACAGAAAAGAGGCTGCTGATCAGTCAATGAAGGCATACCAGACCGCTTTCACTACAGCAGAGGCTGAGTTACCTTCCACACATCCCATCAGATTGGGCTTGGCTTTGAACTTCTCCGTCTTTTATTACGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAAGCATTTGATGAAGCAATCTCTGAGTTGGATAGCCTGAGTGAGGAGTCTTACAAAGACAGCACACTTATTATGCAGCTTCTGAGGGACAACCTCACGTTGTGGACTTCTGACATCCCTGAAGAAGGAGCGTGA 732 0.4522 MASTKERETFVNTAKLAEQAERYEEMVEAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEETKGNDLNVKRIKEYRQKVESELDKICSDIMTVIDEHLIPSSPGGEPSVFFYKMKGDYYRYLAEFKPGDDRKEAADQSMKAYQTAFTTAEAELPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGA* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0508 243 PANTHER 14-3-3 PROTEIN 4 241 IPR000308 -
Lan12g0508 243 Pfam 14-3-3 protein 14 235 IPR023410 -
Lan12g0508 243 Gene3D - 1 242 IPR036815 -
Lan12g0508 243 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lan12g0508 243 SMART 1433_4 7 243 IPR023410 -
Lan12g0508 243 Coils Coil 13 46 - -
Lan12g0508 243 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Lan12g0508 243 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lan12g0508 243 Coils Coil 195 215 - -
Lan12g0508 243 PIRSF 14-3-3 1 243 IPR000308 -
Lan12g0508 243 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lan12g0508 243 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0508 Lan-Chr12 11764873 11769683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0508 1 243 14-3-3 family AT2G42590 81.481 7.37e-149 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0508 K06630 - gmx:100807980 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0508 12 11764873 11769683 Lan1g1746 1 31788333 31792504 LSH
Lan12g0508 12 11764873 11769683 Lan1g0553 1 7258707 7262666 LSH