Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0505 ATGGCTTCTTCTCCTGGTGGTTCAAGCTCTCTTCAAAACTCTCCTTATGGTTCTGAGGGAGACCAACAGCCACAACATGTAATGGATCAAAAGAAGAGGAAGAGAATGTTGTCTAATAGAGAATCAGCACGTAGATCAAGGATGAAGAAACAGAAGCACCTTGATGATCTAATAGCTCAAGTTGATGAGCTCAACAAAGAGAACAACCAAATAAACACAAGGGTAGAGATCACTACTCAGCATTACTTTAAGATTGAGGCTGAGAATGCTATTATTAGAGCTCAGGTTGAAGAACTAAGTAACAGGTTGCAGTCTCTTAATGAAATCATTGATTCTATAAATTCACCATGCAATTATATCATTGATGAAGCTGATCAAGAGACTTTGTTCAATGATTGTGGCTTCATGATGGACCCTTGGAACTATGTGAATGTTAATCAACCAATCGTGGTATCTGCTGACATGTTGATGTATTGA 477 0.3836 MASSPGGSSSLQNSPYGSEGDQQPQHVMDQKKRKRMLSNRESARRSRMKKQKHLDDLIAQVDELNKENNQINTRVEITTQHYFKIEAENAIIRAQVEELSNRLQSLNEIIDSINSPCNYIIDEADQETLFNDCGFMMDPWNYVNVNQPIVVSADMLMY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0505 158 Coils Coil 89 109 - -
Lan12g0505 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Lan12g0505 158 Pfam bZIP transcription factor 31 88 IPR004827 GO:0003700|GO:0006355
Lan12g0505 158 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 157 - -
Lan12g0505 158 MobiDBLite consensus disorder prediction 1 52 - -
Lan12g0505 158 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Lan12g0505 158 Gene3D - 29 83 - -
Lan12g0505 158 Coils Coil 47 81 - -
Lan12g0505 158 SUPERFAMILY Leucine zipper domain 31 85 IPR046347 GO:0003700|GO:0006355
Lan12g0505 158 MobiDBLite consensus disorder prediction 25 52 - -
Lan12g0505 158 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Lan12g0505 158 MobiDBLite consensus disorder prediction 1 24 - -
Lan12g0505 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Lan12g0505 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0505 Lan-Chr12 11738096 11738820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0505 27 158 bZIP Transcription Factor Family AT4G34590 53.623 1.45e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan12g0505 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0505 K25786 - gmx:778140 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0505 12 11738096 11738820 Lan1g1741 1 31737313 31738784 LSH
Lan12g0505 12 11738096 11738820 Lan1g0557 1 7329645 7330456 LSH