Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0504 ATGGAAAGATATAAAAAGATTGAATTTTTGTTGTTCTTTAAGAAAGAAAAAAAATCACCCAAAAAGTTGGGATTGGTGAGAATAAAATCAAAGAGACAAGGTGACATCAAAAGATCAAAATTTAGTTGTAGAAATAACAAGAAAATGGCAACTTTAGTTGAGCCTCCCAGCAGAATTAAGCCAAAGGGTAAGCATTATTACACAATATGGCAGACAATGTTTGAGATTGATACCAAATATGTTCCAATCAAGCCAATCGGCCGAGGATCGTACGGTGTGGTATGCTCTTCCATCAATAGGGAGACTGACGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTGTATTGATGCATTGAGAACATTGAGGGAGCTGAAGCTGCTTAGGCATATTCAGCACGAGAACGTGATCGCTTTGAAGGATGTTATGATGCCTATCCAGAGAACAAGTTTTAAGGATGTCTATTTGGTCTATGAACTCATGGATACTGATCTTCATCAGATTATCAAGTCCTCGCAGCCACTTTCTGGTGATCATAGCAAATATTTTTTGTTTCAGCTGCTCCGAGGTCTTAAATATCTTCATTCTGCAAATATTCTTCACAGAGACTTGAAGCCTGGGAATCTGCTTGTCAATGCCAATTGTGATTTGAAAATATGTGACTTTGGACTTGCAAGGACTAATGGTGTTGATGGCCAGTTTATGACAGAGTATGTTGTTACTCGCTGGTATCGTGCTCCGGAGCTCCTACTATGCTGTGACAATTACGGAACCTCGATTGATGTTTGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCGATCTTCCCTGGAACTGAGTGCCTCAACCAGTTGAAACTAATCATTAGTGTTCTCGGAAGCCAGAATGAATCTGATCTTGGTTTTATTGACAATCCGAAAGCCAGGAGGTTTATCAGATCACTTCCTTATACAAGGGGTAGACACTTCTCTCAGCTTTATCCACAAGCAGATCCATTAGCCATAGACTTGTTGCAAAAAATGCTTGTATTTGATCCAACTAAGAGAATCACTGTCTTAGAAGCACTCCAACACCCATATATGAATGGCCTATATGATCCAAGGAATAATCCTCCTGCCCAGGTTCCAATAAATCTCGACATCGATGAAAATTGGGGTGAACCGGTCATTAGAGAAATGATGTGGTCAGAGATGCTTCACTATCATCCTGAAGCTTTTTCTGTCAATGCATAA 1251 0.3933 MERYKKIEFLLFFKKEKKSPKKLGLVRIKSKRQGDIKRSKFSCRNNKKMATLVEPPSRIKPKGKHYYTIWQTMFEIDTKYVPIKPIGRGSYGVVCSSINRETDEKVAIKKIGNIFENCIDALRTLRELKLLRHIQHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSGDHSKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQNESDLGFIDNPKARRFIRSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMNGLYDPRNNPPAQVPINLDIDENWGEPVIREMMWSEMLHYHPEAFSVNA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0504 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 45 411 - -
Lan12g0504 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 45 411 - -
Lan12g0504 416 CDD STKc_TEY_MAPK 74 409 - -
Lan12g0504 416 SUPERFAMILY Protein kinase-like (PK-like) 72 374 IPR011009 -
Lan12g0504 416 Pfam Protein kinase domain 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0504 416 Gene3D Transferase(Phosphotransferase) domain 1 164 388 - -
Lan12g0504 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lan12g0504 416 Gene3D Phosphorylase Kinase; domain 1 67 391 - -
Lan12g0504 416 ProSitePatterns Protein kinases ATP-binding region signature. 86 110 IPR017441 GO:0005524
Lan12g0504 416 SMART serkin_6 80 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0504 416 ProSitePatterns MAP kinase signature. 115 218 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan12g0504 416 ProSiteProfiles Protein kinase domain profile. 80 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0504 Lan-Chr12 11726380 11730824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0504 49 416 MAP Kinase Gene Family AT2G18170 84.239 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan12g0504 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0504 K20537 - gmx:100783422 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0504 12 11726380 11730824 Lan1g1740 1 31723618 31727935 LSH
Lan12g0504 12 11726380 11730824 Lan6g0772 6 7111433 7115266 LSH