Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0503 ATGTGTGTGTGTTTCGGCTTAAACTTAATTGCATTTGTACTAATGGGTATCCAAAATCACAATAACCAAAAGGAAAAAGAGAGTGGATTAAGAGAGACTCTCAAGATCAAGAACAAGTCCAAAAAGTTTGTTGGGGTGAGACAAAGGGCTTCAGGGAAATGGGCAGCAGAAATTAAAGACACATCAAAGAAGATTAGAATGTGGCTTGGAACTTATAGAACTGCTGAAGAAGCTGCTAGAGCTTATGATGAAGCTGCATGCCTCCTTAGAGGTTCAAACACTCGCACCAACTTTTCTACTCACCATGATAGCATTGCTACCAATTCTCCTATATCTCTCAAAATCAAAAAACTACTTGACCATAAAGCCATGCCAAATGAAAAGAAACTCCAAAGCCAATCCACTATGAGCACAAGTGTCACTGTCCAAGGTGCTTCTAGTGAAGTGATTCCAAATGTTAGTGTTGGTATCAATAGCATCATGGTCATGGAAGATAACAGTACTGCATGTAGTAGTAGTAGTAGTAATGAAGCTAAGTCTTTGTTTTGGGTTCAAAACCAAGTCTATGATACTAGGCCATATAGGCCAGACATGAATATGATGAACTATTCAATGGACCTTGTTGAACCAAATACATGGCAGTTTGATTATTCTTGGCCATTATCACAACAAAGGAGTAATGAGTTACCAATGCTATCACCAAAAGATGGCTTGAATGAGTGGTATATGGAGGATCCATATCAATATGAATATGATGTCAATTACCCTCTCCCTCATTTCTTTTGCTTCACTTGA 795 0.3836 MCVCFGLNLIAFVLMGIQNHNNQKEKESGLRETLKIKNKSKKFVGVRQRASGKWAAEIKDTSKKIRMWLGTYRTAEEAARAYDEAACLLRGSNTRTNFSTHHDSIATNSPISLKIKKLLDHKAMPNEKKLQSQSTMSTSVTVQGASSEVIPNVSVGINSIMVMEDNSTACSSSSSNEAKSLFWVQNQVYDTRPYRPDMNMMNYSMDLVEPNTWQFDYSWPLSQQRSNELPMLSPKDGLNEWYMEDPYQYEYDVNYPLPHFFCFT* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0503 264 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 22 205 - -
Lan12g0503 264 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Lan12g0503 264 Gene3D AP2/ERF domain 41 101 IPR036955 GO:0003700|GO:0006355
Lan12g0503 264 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Lan12g0503 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 22 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0503 Lan-Chr12 11713583 11714591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0503 35 119 AP2-EREBP Transcription Factor Family AT5G19790 73.034 2.28e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan12g0503 AP2 8.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0503 K09286 - gmx:100803832 258.84