Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan12g0496 | ATGGCCGTACCGTTGCTGTCGAAGAAGATCATTAAGAAGAGGGTCAAGAGATTCAAGAGACCCCAGAGTGATCGCAAGATCTCCGTCAAGCCAAGCTGGCGCAGACCCAAGGGTATTGATTCCCGTGTTAGAAGAAAGTTCAAGGGATGTGTTCTTATGCCAAACATTGGTTATGGCAGTGACAAGAAGACCCGTCACTATCTCCCCAATGGTTTCAAGAAATTTGTTGTTCACAATGTGTCTGATTTGGAACTTCTATTGATGCACAACAGGACTTACGCCGCGGAGATTGCTCACAATATCTCTACCAGAAAGAGGAAGGAAATCGTTGAGAGAGCTGCTCAACTTGATGTTGTTGTGACTAACAAAACAGCAAGACTCCGCAGCCAAGAGGATGAATAG | 402 | 0.4552 | MAVPLLSKKIIKKRVKRFKRPQSDRKISVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVSDLELLLMHNRTYAAEIAHNISTRKRKEIVERAAQLDVVVTNKTARLRSQEDE* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan12g0496 | 133 | Pfam | Ribosomal protein L32 | 16 | 122 | IPR001515 | GO:0003735|GO:0005840|GO:0006412 | |
Lan12g0496 | 133 | SMART | Ribosomal_L32e_2 | 15 | 122 | IPR001515 | GO:0003735|GO:0005840|GO:0006412 | |
Lan12g0496 | 133 | PANTHER | 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N | 1 | 133 | IPR001515 | GO:0003735|GO:0005840|GO:0006412 | |
Lan12g0496 | 133 | CDD | Ribosomal_L32_L32e | 18 | 122 | IPR001515 | GO:0003735|GO:0005840|GO:0006412 | |
Lan12g0496 | 133 | PANTHER | 60S RIBOSOMAL PROTEIN L32-1-LIKE | 1 | 133 | - | - | |
Lan12g0496 | 133 | SUPERFAMILY | Ribosomal protein L32e | 2 | 131 | IPR036351 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan12g0496 | Lan-Chr12 | 11588028 | 11590431 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan12g0496 | 1 | 133 | Cytoplasmic Ribosomal Protein Gene Family | AT4G18100 | 82.707 | 1.50e-82 | 236 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan12g0496 | K02912 | - | gmx:100787561 | 244.202 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan12g0496 | 12 | 11588028 | 11590431 | Lan1g1735 | 1 | 31631355 | 31633410 | LSH |