Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0496 ATGGCCGTACCGTTGCTGTCGAAGAAGATCATTAAGAAGAGGGTCAAGAGATTCAAGAGACCCCAGAGTGATCGCAAGATCTCCGTCAAGCCAAGCTGGCGCAGACCCAAGGGTATTGATTCCCGTGTTAGAAGAAAGTTCAAGGGATGTGTTCTTATGCCAAACATTGGTTATGGCAGTGACAAGAAGACCCGTCACTATCTCCCCAATGGTTTCAAGAAATTTGTTGTTCACAATGTGTCTGATTTGGAACTTCTATTGATGCACAACAGGACTTACGCCGCGGAGATTGCTCACAATATCTCTACCAGAAAGAGGAAGGAAATCGTTGAGAGAGCTGCTCAACTTGATGTTGTTGTGACTAACAAAACAGCAAGACTCCGCAGCCAAGAGGATGAATAG 402 0.4552 MAVPLLSKKIIKKRVKRFKRPQSDRKISVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVSDLELLLMHNRTYAAEIAHNISTRKRKEIVERAAQLDVVVTNKTARLRSQEDE* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0496 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan12g0496 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan12g0496 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan12g0496 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lan12g0496 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1-LIKE 1 133 - -
Lan12g0496 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0496 Lan-Chr12 11588028 11590431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0496 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 82.707 1.50e-82 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0496 K02912 - gmx:100787561 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0496 12 11588028 11590431 Lan1g1735 1 31631355 31633410 LSH