Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0447 ATGTATCTTTCCCAAAAACATCGTCCCATTGATTTCTACAAAGAACAACAACAAGACCCCACCACCCGAGACATGATCATAGACCTCGTCGTTTCAAACAACAACCACTTCCCACCACCCAACCACCATCACCACCACATCATCCTCGCCGATAGCAGCGGCGACGAACCCGAACAACCTGAGATCAGAGCCCCTAAGAAACGTGCAGAAACTTGGGTCCAAGACGAGACCCGAACCCTCATTGCGCTTCGTCGTGAGAGAGACATTCTCTTCAATGCTTCCAAATCTAACAAACACTTGTGGGAACAGATTTCTTCTAAGATGAAGGGAAAAGGGTTCGATCGATCTCCAACCATGTGTACTGATAAATGGAGGAATCTGTTGAAGGAGTTCAAGAAAGCGAAGCATCGAGATAGAAGAGGAACTGGGTCTGGTGCTAAGATGAGTTATTACAAAGAGATTGAGGATATTTTAAGGGAGAGAGGAAAATCTGTGCAATATAAGACACATTGCAATCATAAAGTTGATTCCTTTATGCAATTTGTGGATAAAGGTATGGAAGATACCAGCATCTCTTTTGGGCCTGTTGAAGCTACCGGCAGACCAACATTCAATCTTGAGAGACGTTTGGATCACGATGGACATCCTCTTGTGCTGACCACAGCTGCTGATGCAGTTGGAGCTAATGGAATTCCTCCTTGGAATTGGAGAGAAACTCCTGGAGGTGGTGAAGAAGGCCAGTCCTCTTGTGGAAGGGTTATATCAGTCAAATGGGGCGAGTATACAAGAAGGGTAGGTATTGATGGTGCTCCAGAAGCCATCAAGGAGGCAATCAGGGCTGCTTTTAGGTTAAGAACTAAACGTGCATTTTGGTTGGAGGATGAAGACCAGGTCATTAGAAGTATTGATCGTGACATGCCTGTGGGAAGCTACACTCTTCACCTTGATGAAGGAATGGCCATTAAGGTATGCCTCTATGATGAATCTGACCATATCCCTGTGCATACCGAAGACAAGATCTTTTACACCGAAGACGATTATCATGATTTTCTTACTCGCCGTGGTTGGACCTGTCTAAGGGAATTTGATAGCTTCAGACATATTGATACTCTGGATGATCTTCGACCCGGTGCCATGTACCGTGGCGTGAGTCTGAGTCCAGGTACACTGTAG 1173 0.4552 MYLSQKHRPIDFYKEQQQDPTTRDMIIDLVVSNNNHFPPPNHHHHHIILADSSGDEPEQPEIRAPKKRAETWVQDETRTLIALRRERDILFNASKSNKHLWEQISSKMKGKGFDRSPTMCTDKWRNLLKEFKKAKHRDRRGTGSGAKMSYYKEIEDILRERGKSVQYKTHCNHKVDSFMQFVDKGMEDTSISFGPVEATGRPTFNLERRLDHDGHPLVLTTAADAVGANGIPPWNWRETPGGGEEGQSSCGRVISVKWGEYTRRVGIDGAPEAIKEAIRAAFRLRTKRAFWLEDEDQVIRSIDRDMPVGSYTLHLDEGMAIKVCLYDESDHIPVHTEDKIFYTEDDYHDFLTRRGWTCLREFDSFRHIDTLDDLRPGAMYRGVSLSPGTL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0447 390 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 383 - -
Lan12g0447 390 CDD GT1 70 135 - -
Lan12g0447 390 ProSiteProfiles Myb-like domain profile. 64 128 IPR001005 -
Lan12g0447 390 Gene3D - 72 134 - -
Lan12g0447 390 Pfam Myb/SANT-like DNA-binding domain 71 156 IPR044822 -
Lan12g0447 390 SMART sant 68 130 IPR001005 -
Lan12g0447 390 PANTHER - 5 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0447 Lan-Chr12 10438658 10444816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0447 24 383 Trihelix Transcription Factor Family AT3G25990 66.485 5.93e-177 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan12g0447 Myb_DNA-bind_4 8.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0447 - - aip:107632016 610.912