Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0446 ATGACCATGTTGGATGGAGTGTTGGGAATTGTCAATGTGGCATTCTTCTATGCAATTCTGATTTGGGTTTTGGTTGATAGTTTAAGACAAAGCAAGAAAAACAATATTGCATACCTTAAACAAGGACCAAAGGTGTTAGCCACAATCACTGTTCTATGCAATGTTGTTATTTCAGTTATGAACATGGCTTTTGCTTTTCATGAATATAGGATTAAGAGAATCATAGGATATAACTCTCTTTCCTTGTCTCTAACATGGGTCTTGTCAACTATAGTTTCATTTTATTCAATGAAAAGAAGAACACTTAACCAAAGGTTCCCCCTTGTTCTAAATCTATGGTGGGGTTTCACCACAATCATAGTTGCACTCTCAGTTTCTATAGAAATAGTGAACAATTTTGAGTCCTTGAACTTGTGGTTTTTCCTGTCCGGGGATATCATACTTGGTATGGTTTCATTGTCCATGTTGTTGTTTCTTGTATGTTTTGATGCACTTCCCTATGTATTATGTGCAAGGGAACAACAACATAATGATAGTGATATGAAACAAAGGTTACTTCAACAAGAGATGGAAGCAGAAGATGAAGATGCCTTCACAAATGCAAACATGTGGAGCCAACTTACATTCCAATGGCTGAATCCCATTTTTAACAAGGGTAGAATTCAGAAACTCGAACATGGTCACATTCCTTCTGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTGTTGGAAGAATCACTTCGCAAACAGAAACTTGAAGGGGGTTCCTTGACAAAAGCTATAACCCATTCTATCTGGAAATCCTTGGCTTTAAATGCAATTTTTGCAGGTGTTAACACAATTGCCTCTTATATGGGACCATTGTTGATTACAAACTTTGTGAATTTCTTATCTGGGAATGATGGCAATTCAAGCATCCAATATAGGCTGATTCTTGCATTCATTTTCTTCCTATCAAAGACTGTGGAGTCATTAAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATCGGAATCCGTGTGCGTGCAGCTCTAATGGCTCTAGTTTACAGCAAGTCCTTATTGATGAAGTGTGCTGGACCAACACATGGTAAAGTCATAAATTTGATCAATGTGGATGTTGAAAGAATTGGAGACTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAAGTCATTTTGGCCTTGGTGATCTTATACATAAATTTGGGTTATATCCCTTCCATTGCTGCACTTGTTGTCACCATTTTGGTCATGGTGTGTAACACACCTTTGGCAAATATGCAAGAAAATCTCCACTCCAAGATCATGGAAGCTAAGGATTCAAGAATCAAAGTGACTTCAGAGACCATGAAGAACATGAGGATCTTAAAATTGCATTCATGGGAATCCACATTCTTACAGAAACTCCTTCAACTCAGGGATACTGAGAGCAATTGGCTGCAGAAATACCTCTACATATGCTCGGCAATAGCTACTCTATTTTGGGCATCTCCAACTTTAGTTTCTGTTGTCACGTTTGGTGCATGTATATTGGTGAAAACAGAACTAACAGCAGCCACTGTCCTTTCAACTTTAGCGACTTTTCGGATTCTACAAGATCCAATCTACAACCTACCTGAGCTTATTTCCATGATAGCTCAAACAAAAGTCTCGGTTGATCGAATCCAGGAGTTCATTAAGGCAGAGGATCAGAACCAATTCATGAATAAGCATGCTTCAAACACTTCACCAATTGCTATTGAAATCAGGCCAGGTGAATATGCTTGGGATACATATGATCAAGTTCCCAAGAAACCAACAATTCAAATTACGGAAAAAATGATGATAAAGAAGGGTCAGAAGGTTGCAGTCTGTGGATCAGTGGGGTCTGGCAAATCAAACTTACTTTGCTGTATGCTTGGTGAGGTTCCATTGGTTTCTGGTGCATTGATCAAAGTCTATGGTACTAAAAGTTATGTACCTCAGAGTCCTTGGATTCAGTCTGGAACTATTAGAGAAAATATCTTGTTTGGCAAGAAAATGAATAAGGACTTCTACGAAAATGTTTTGGATGTCTGCGCTTTGCATCAGGATATAAACATGTGGGTTGATGGAGATTTGACCCTGGTGGAGGAGAGGGGCTTAAACTTAAGTGGAGGGCAGAAACAGCGGATTCAACTTGCAAGGGCTGTTTACAATGATTCCGATATTTATTTCCTTGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTTATGCAACTTTTGTCTGAGAAAACAGTTGTTTATGCTACTCATCAACTGGAATTCTTGGAAGCTGCAGATATCGTTTTAGTAATGAAAGATGGTAAAATAGTGGAATCAGGAAGGTATGAAGATCTCATGGCATGTTCTAATTGTGAACTTGTTCAACAAATGGCTGCTCATGAAGAAACAGTGAACCAAATAAATCCACTCCAAGAAGATGATTATGTTAGCTGCAAACCATGCCAGAAAAATCAAATTGAAGTTGCTGAAGAAATTTTTCAAGAGTCAATCAAGGATTGGAAGAGAAGCAAAGAAGAGGAAGCAGAGACGGGTCGGGTGAAATGGAGTGTTTACTCAACTTTTGTCACATGTGCTTATAGAGGCGCATTTGTTCCAGCTATTATTGTCTGCCAAATTCTTTTTCAAGTTTTGCAGATGGGAAGCAATTATTGGATTTCTTGGGCCTCAGAACAGGACAGTGTCAGCAAAGGGAAGCTAATGGGGACATTTATGCTTCTGTCTAGTGGCAGCTCCATCTTCATCCTGGGAAGGACTGTTTTGATGACAACAGTTGCTGTCAAGACTGCTCAGCGCCTTTTTCATGGAATGATTACATCGGTGTTCAGGGCACCTGTTTCATTTTTCGACACAACACCTTCAAGCCGAATCCTCAGTAGGTCATCTACGGATCAAAGCACAGTAGACACAGACATACCATACAGATTGGCTGGACTAGTATTTGCACTTATCCAGTTGTTGAGTATCATCATGCTAATGTCCCAGGCTTCCTGGCAAGTCATTCTCCTCTTTCTCGTTGTGTTTGCTATCTCGATCTGGTATCAGGCTTATTACATAACTACAGCTAGGGAATTAGCCAGGATGGTTGGGATTAGAAAGGCTCCAATCTTACATCACTTCTCAGAATCGATTGCTGGGGTTGCTACAATCCGTTGTTTTAATCAAGAGCAAATATTCATTGACAAAGTTAAGGCTCTAATTGATGATTATTCCAGGGTAGCCTTTCACAATGATGCCACAATGGAATGGTTGTCAGTCCGAATAAATTTTCTTTTCAATCTGGTATTCTATTTTGTTCTAATCATCTTGGTTATGCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTAGTGGCCACCTATGGTTTGAATTTGAGTGTCCTTCAAGCTTGGGTGATATGGAATCTCTGCAATGTTGAGAACAAAATGATATCGGTTGAGAGGATATTACAATTCTCTAGTATACCAAGTGAAGCACCATTAGTAATTCAAGATTGCAGACCTGAACCTGAGTGGCCTAGGGAGGGAAAAATTGAGTTTCATAACCTTCACATACAGTATGATCCTGCAGCTCCTATGATTCTCAAAGGTGTCACCTGCACCTTTCCTGGACAAAAGAAGATTGGAGTAGTGGGAAGGACAGGCAGTGGAAAATCGACATTGGTGCAAGCCCTCTTTCGAGTCGTGGAGCCTTTGAAAGGATGGATACTTATTGATGGTGTACATATTTCGAAGATCGGCTTGCAGGATTTGAGATCTAAACTTGGTATAATTCCTCAGGACCCAACCTTGTTTCTAGGCACTGTGAGGACTAATTTGGATCCACTAGAACAACATGCAGATCAAGAACTTTGGGAGGTTCTCAGCAAGTGCCATCTAGCTAAAATAGTAAGGCAGGATCCAAGGCTTCTTGATGCACCAGTGGCTGAAAATGGAGAAAATTGGAGTGTTGGACAAAGGCAACTTGTTTGCTTGGCTAGGCTGCTGTTGAAGAAAAGAAGAATTTTGGTTCTAGATGAGGCAACTGCATCTATTGACACTGCAACAGATAACTTAATTCAGAAGACTATTAGGGAAGAAACAAGTGGATGCACAGTCATAACTGTAGCACATAGAATTCCTACAGTAATTGATAATGACTTAGTTTTGGTCCTAGATGAAGGGACAATTGTGGAGTTTGACCACCCAGGTCAATTGCTACAGAACAATTCTTCTTCATTCTCAAAGTTGGTGTCGGAATTTGTGAGGAGATCATCCCAAAGTAGCTAA 4335 0.4002 MTMLDGVLGIVNVAFFYAILIWVLVDSLRQSKKNNIAYLKQGPKVLATITVLCNVVISVMNMAFAFHEYRIKRIIGYNSLSLSLTWVLSTIVSFYSMKRRTLNQRFPLVLNLWWGFTTIIVALSVSIEIVNNFESLNLWFFLSGDIILGMVSLSMLLFLVCFDALPYVLCAREQQHNDSDMKQRLLQQEMEAEDEDAFTNANMWSQLTFQWLNPIFNKGRIQKLEHGHIPSVPHSETAENASSLLEESLRKQKLEGGSLTKAITHSIWKSLALNAIFAGVNTIASYMGPLLITNFVNFLSGNDGNSSIQYRLILAFIFFLSKTVESLSQRQWYFGAQRIGIRVRAALMALVYSKSLLMKCAGPTHGKVINLINVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGYIPSIAALVVTILVMVCNTPLANMQENLHSKIMEAKDSRIKVTSETMKNMRILKLHSWESTFLQKLLQLRDTESNWLQKYLYICSAIATLFWASPTLVSVVTFGACILVKTELTAATVLSTLATFRILQDPIYNLPELISMIAQTKVSVDRIQEFIKAEDQNQFMNKHASNTSPIAIEIRPGEYAWDTYDQVPKKPTIQITEKMMIKKGQKVAVCGSVGSGKSNLLCCMLGEVPLVSGALIKVYGTKSYVPQSPWIQSGTIRENILFGKKMNKDFYENVLDVCALHQDINMWVDGDLTLVEERGLNLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQLLSEKTVVYATHQLEFLEAADIVLVMKDGKIVESGRYEDLMACSNCELVQQMAAHEETVNQINPLQEDDYVSCKPCQKNQIEVAEEIFQESIKDWKRSKEEEAETGRVKWSVYSTFVTCAYRGAFVPAIIVCQILFQVLQMGSNYWISWASEQDSVSKGKLMGTFMLLSSGSSIFILGRTVLMTTVAVKTAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIMLMSQASWQVILLFLVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQEQIFIDKVKALIDDYSRVAFHNDATMEWLSVRINFLFNLVFYFVLIILVMLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLVIQDCRPEPEWPREGKIEFHNLHIQYDPAAPMILKGVTCTFPGQKKIGVVGRTGSGKSTLVQALFRVVEPLKGWILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADQELWEVLSKCHLAKIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGTIVEFDHPGQLLQNNSSSFSKLVSEFVRRSSQSS* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0446 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1192 1426 IPR027417 -
Lan12g0446 1444 CDD ABC_6TM_ABCC_D1 273 560 IPR044746 GO:0140359
Lan12g0446 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1163 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0446 1444 PANTHER OS01G0902100 PROTEIN 107 1442 - -
Lan12g0446 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 804 IPR027417 -
Lan12g0446 1444 CDD ABCC_MRP_domain2 1198 1418 - -
Lan12g0446 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1200 1434 IPR003439 GO:0005524
Lan12g0446 1444 SUPERFAMILY ABC transporter transmembrane region 266 567 IPR036640 GO:0005524|GO:0016021
Lan12g0446 1444 Gene3D - 611 834 IPR027417 -
Lan12g0446 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 813 IPR003439 GO:0005524
Lan12g0446 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 272 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0446 1444 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 107 1442 - -
Lan12g0446 1444 CDD ABC_6TM_ABCC_D2 886 1175 IPR044726 GO:0140359
Lan12g0446 1444 SMART AAA_5 1226 1417 IPR003593 -
Lan12g0446 1444 SMART AAA_5 616 790 IPR003593 -
Lan12g0446 1444 ProSitePatterns ABC transporters family signature. 715 729 IPR017871 GO:0005524
Lan12g0446 1444 Pfam ABC transporter 612 742 IPR003439 GO:0005524
Lan12g0446 1444 Pfam ABC transporter 1217 1365 IPR003439 GO:0005524
Lan12g0446 1444 SUPERFAMILY ABC transporter transmembrane region 888 1180 IPR036640 GO:0005524|GO:0016021
Lan12g0446 1444 Pfam ABC transporter transmembrane region 889 1125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0446 1444 Pfam ABC transporter transmembrane region 273 539 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0446 1444 Gene3D - 1183 1436 IPR027417 -
Lan12g0446 1444 Gene3D ABC transporter type 1, transmembrane domain 850 1181 IPR036640 GO:0005524|GO:0016021
Lan12g0446 1444 Gene3D ABC transporter type 1, transmembrane domain 259 570 IPR036640 GO:0005524|GO:0016021
Lan12g0446 1444 CDD ABCC_MRP_domain1 585 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0446 Lan-Chr12 10421174 10427871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0446 601 820 Calmodulin-binding Proteins AT2G36910 31.120 2.72e-21 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0446 - - adu:107481980 2315.81