Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0442 ATGGCAGCTGGGAGACATGGTGGTTACGGTGACAATGAGGTCAGGGACCGTGAGTCGAATGTCCGGGGAGTTTTTGCGAATTCGAAAGATGAGTTGGATTGTGTTAGGAATGGTGACCGTGAGATTGTCAGAGGTGGGAGTAGGGGTGCAAGGGATAGGACTAGGGTTCAGCAGAGGGATATCAGGGAGGGAGAAGGTTCTGTGAATGGTAGTTACCGGTCATTGTCATCAAGTAGGAGTGATTCTGGTAGCAGTGGTGGCCTTGGTCCCCGGCGGTGTGTTTTTTCTTTGAAGACGATGGATAGGGAGCCCGGTGAACTATCGAGTGAGAGTGGGTCTGATGATGGTATTGAATCAGAATCTTGGATGGTGAAAGAGACTGAGGTTATTGTGAAGGTTGAAGAAAGCAGGAAGAGGAAGTTTTCACCGATAGTATGGGATCAGGATGACAAGGAAGTGAATGAGTCATCCAAATCCAAAGTTACGGTTTCTATGACATCGGTGACTAAACTTCCACCTCCGCCACCACTGCCAAAAGCGTTTTCTAAGCCGCCTAGTGTTCCATATGGTGGAGTTGAAGTAAGTGCTGTTGAAAAAGGAGAAGGTGGGGATCTTGAGTTGCCTGCAGAAACTGAGGTTAATGATCAGGAGCAGACTTGGGGCAATAATGATCCGGAAGCTGAGCCTGAGCTGCCAGAAAGGGAAGATATTGTTCCAGCTCGAAATATATCATCTTCAAGATGGGCCGATAGAGACAACTCTCCCGGTGATGAAGGTGAAATAGGTGTAGATGAGGAAATGCCTAAAAACAGGAGGAGGAGGAGGATGACTCCCGAGGAGTTGGATACGAGAGTAAGGAACAAGCTATTGAGCCCGGAGGAATCTAAAAGAGGAGGTAGAGCTAAATCTACTGATTCTGGTGGAAGAGGTAGCCATGGGAGGACTTCCAGCGGGGACAATCATCCTGGTAGTGCATCTGAAAAGGATGACTACATGGAGATTGATGCTCAAGGTGGAGAATCTGAAGATGAGTATCATATTCATAGTGTTAGTCACTCAGATACAGAATCTGAAGATGAGGATCATGGACGGGGGACTCCAGAACCTCCTACTCCTCCACAAAGATCGGTTAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACTTACGGTGTTGTATATAGAGCCAGAGATAAGAAGACTGGGGAAACTGTAGCCTTGAAGAAGGTCAAGATGGAGAAGGAAAGGGAAGGATTTCCGTTGACTTCGCTTAGGGAAATAAACATTCTTCTTTCATTTCACCATCGATCCATAGTTGATGTCAAGGAAGTAGTAGTAGGCAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGTCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATTCAGCTTTTAGAAGGTGTGAAATATCTTCATGAGAACTGGGTGCTTCACAGGGATTTGAAGACGTCGAACCTGCTCCTGAATAATAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAACCGTATACACAGTTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTTTGGGGGCAAAACAGTACTCAACAGCCATTGATATGTGGTCTCTAGGTTGTATAATGGCTGAGCTATTATCTAAGGAACCTCTATTTAATGGGAGAACGGAATTTGATCAACTAGACAAGATTTTCAGGATTCTTGGCACACCAAACGAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGCTTCCAACTTTGGGTGGTTCTGGTCTTGCTATCTGGCCTCTCTTGGTGAATTGTACTGTTACCACTTTTCTAGCTTGTATTAACAATCAGAATGTTCTTTTCAGGTATAACCTTCTGCGTAAAAAGTTTCCTGCTACGTCATTCACTGGATCTCCAGTTCTTTCTGACTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGAATCACGGTTGAAGCTGCCCTAAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGGACACGAAGGGTGTTGAAGAGTCCAGATCCCTTAGAAGAGCAGCGCCGAAAGGAGTTGCGGGGTGAAACAGGGACCGGGGGGATTTTTGGCTAA 2310 0.4506 MAAGRHGGYGDNEVRDRESNVRGVFANSKDELDCVRNGDREIVRGGSRGARDRTRVQQRDIREGEGSVNGSYRSLSSSRSDSGSSGGLGPRRCVFSLKTMDREPGELSSESGSDDGIESESWMVKETEVIVKVEESRKRKFSPIVWDQDDKEVNESSKSKVTVSMTSVTKLPPPPPLPKAFSKPPSVPYGGVEVSAVEKGEGGDLELPAETEVNDQEQTWGNNDPEAEPELPEREDIVPARNISSSRWADRDNSPGDEGEIGVDEEMPKNRRRRRMTPEELDTRVRNKLLSPEESKRGGRAKSTDSGGRGSHGRTSSGDNHPGSASEKDDYMEIDAQGGESEDEYHIHSVSHSDTESEDEDHGRGTPEPPTPPQRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGETVALKKVKMEKEREGFPLTSLREINILLSFHHRSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKCLMIQLLEGVKYLHENWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTQLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQLPTLGGSGLAIWPLLVNCTVTTFLACINNQNVLFRYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITVEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRTRRVLKSPDPLEEQRRKELRGETGTGGIFG* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0442 769 MobiDBLite consensus disorder prediction 151 378 - -
Lan12g0442 769 Gene3D Transferase(Phosphotransferase) domain 1 472 747 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 1 120 - -
Lan12g0442 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Lan12g0442 769 MobiDBLite consensus disorder prediction 9 24 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 731 769 - -
Lan12g0442 769 ProSiteProfiles Protein kinase domain profile. 389 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0442 769 MobiDBLite consensus disorder prediction 308 322 - -
Lan12g0442 769 PANTHER CYCLIN-DEPENDENT KINASE G-2-LIKE 665 769 - -
Lan12g0442 769 PANTHER CYCLIN-DEPENDENT KINASE G-2-LIKE 216 634 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 69 85 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 32 62 - -
Lan12g0442 769 PANTHER CELL DIVISION PROTEIN KINASE 216 634 - -
Lan12g0442 769 PANTHER CELL DIVISION PROTEIN KINASE 665 769 - -
Lan12g0442 769 SUPERFAMILY Protein kinase-like (PK-like) 381 721 IPR011009 -
Lan12g0442 769 SMART serkin_6 389 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0442 769 MobiDBLite consensus disorder prediction 323 366 - -
Lan12g0442 769 CDD STKc_CDC2L1 383 715 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lan12g0442 769 Gene3D Phosphorylase Kinase; domain 1 374 471 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 251 303 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 169 183 - -
Lan12g0442 769 MobiDBLite consensus disorder prediction 735 761 - -
Lan12g0442 769 Pfam Protein kinase domain 389 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0442 Lan-Chr12 10379201 10384548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0442 380 757 Core Cell Cycle Gene Families AT5G10270 41.221 1.65e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lan12g0442 Pkinase 3.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0442 K08818 - gmx:100792524 1016.91