Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0415 ATGAAGAGAGAGCATCACCATCTTCATCCCAATCTCAATAATCCAATTGACTCCACTTCCATGTCAGCTGCCACCTCCGGAAAATCAAAACTCTGGGAGGACGACGGCGGCGGCGGCGGCATGGACGAGCTTCTCGCCGTAGTTGGATACAAGGTCAGATCATCAGACATGGCTGAAGTAGCTCAGAAGATAGAACAACTCGAAGAAGCTATGACTAACTTTGACACTGGTATCTCTTCACTCTCTTCCGATACTATTCATTTCAACCCTTCAGATATCTCCACGTGGCTTGAATCCATGATCTCTGGTCTCACTTCACCACCACAACAACAACAACCTCCAACTGAATCCTCCACCATCACCACTTCTTCCGATTATGACCTCAAGGCTATCCCTGGTAAAGCAATTTATAACAACATTGATAACTATGACACACAGTTTTCAAAGCGTGTGAAATATTCATCGTCATCATCGTCACCTTCTTCTTCCTCTTCGAGTCGGCCAGTAATACTCGTCGATTCGCAAGAAAATGGAATTAGATTAGTCCATACCCTATTGGCTTGCGCTGAGGCCGTAAGCCAAACTAATCTGTCTATTGCTGAAGCCTTGCTTCACCAGATCGGGTTTCTGGCTTTGTCGCAACCTGGCGCTATGCGTAAGGTTGCGACTTACTTTGCTGAAGCTCTGGCGCGGCGAATCTACGGTCTCTTCCCTGAAACGCCGCTGCTTAACCACCGTCTCTCTGATATTATGCTTCATAACCACTTCTATGAAACATGTCCTTACCTCAAGTTCGCACACTTCACTGCAAATCAAGCTATACTGGAAGCTTTTCAAGGCAAGGACCGTGTTCATGTCATCGATTTCAGCATGAACCAAGGGATGCAATGGCCGGCGCTGATGCAAGCGCTCGCTCTTCGTCCTGGTGGTCCACCGGCGTTTAGGTTAACCGGAATTGGACCTCCGGCGATGGATAACTCCGATCACTTGCAAGAAGTTGGTTGGAAACTCGCTCAGCTCGCTGAAACGATTCACGTCGAGTTTGAATTTCGAGGATTTGTTGCTAACAGTCTCGCGGATCTGGACGCGTCGATGCTTGAACTCAGGCCGAGTGAGACCGAGTCAGTAGCGGTTAACTCAGTGTTTGAGTTTCATAAGCTCTTAGCTCGTCCAGGTGCGGTAGAGAAAGTTCTTTCCGTGGTGAAACAGATTAAACCGGAGATCGTGACGGTTGTGGAACAAGAAGCGAACCATAACGGACCGGGTTTTTTAGACCGGTTCACTGAATCACTACATTATTACTCAACAATGTTTGACTCACTAGAGGGGTCAACTTCTGCAGAGTCGCAGGATAAGGTAATGTCTGAGGTTTATTTGGGGAAGCAAATCTGCAACGTGGTGGCGTGTGAAGGAGTTGACCGGGTTGAGAGACATGAAACGTTGAACCAGTGGAGGAACCGGTTCGGTTCAGCAGGGTTTGTTCCGGTTCATTTGGGTTCAAACGCGTTCAAGCAAGCGAGTATGTTGCTGGCGTTGTTTGCAGGTGGTGATGGTTACAGAGTTGAAGAGAACAATGGTTGTTTGATGTTGGGTTGGCACACTAGGCCATTGATTGCTACCTCAGCTTGGAAACTCGGTGCTGTAACTCAGTGA 1653 0.4791 MKREHHHLHPNLNNPIDSTSMSAATSGKSKLWEDDGGGGGMDELLAVVGYKVRSSDMAEVAQKIEQLEEAMTNFDTGISSLSSDTIHFNPSDISTWLESMISGLTSPPQQQQPPTESSTITTSSDYDLKAIPGKAIYNNIDNYDTQFSKRVKYSSSSSSPSSSSSSRPVILVDSQENGIRLVHTLLACAEAVSQTNLSIAEALLHQIGFLALSQPGAMRKVATYFAEALARRIYGLFPETPLLNHRLSDIMLHNHFYETCPYLKFAHFTANQAILEAFQGKDRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAMDNSDHLQEVGWKLAQLAETIHVEFEFRGFVANSLADLDASMLELRPSETESVAVNSVFEFHKLLARPGAVEKVLSVVKQIKPEIVTVVEQEANHNGPGFLDRFTESLHYYSTMFDSLEGSTSAESQDKVMSEVYLGKQICNVVACEGVDRVERHETLNQWRNRFGSAGFVPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLGAVTQ* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0415 550 MobiDBLite consensus disorder prediction 103 122 - -
Lan12g0415 550 MobiDBLite consensus disorder prediction 12 27 - -
Lan12g0415 550 Gene3D - 40 104 IPR038088 -
Lan12g0415 550 ProSiteProfiles GRAS family profile. 172 544 IPR005202 -
Lan12g0415 550 Pfam GRAS domain family 181 544 IPR005202 -
Lan12g0415 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 161 545 IPR005202 -
Lan12g0415 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 124 IPR005202 -
Lan12g0415 550 MobiDBLite consensus disorder prediction 1 36 - -
Lan12g0415 550 SMART DELLA_2 42 114 - -
Lan12g0415 550 Pfam Transcriptional regulator DELLA protein N terminal 42 108 IPR021914 -
Lan12g0415 550 PANTHER DELLA PROTEIN GAI1-RELATED 20 124 IPR030006 GO:0003712|GO:0005634
Lan12g0415 550 PANTHER DELLA PROTEIN GAI1-RELATED 161 545 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0415 Lan-Chr12 9708895 9710961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0415 1 545 GRAS Transcription Factor Family AT2G01570 66.951 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan12g0415 GRAS 9.4e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0415 K14494 - pop:7482891 777.319