Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0404 ATGGCCTTACACATGGATGAACTTGATCATATCCCTTTATTCTTTACATCAATTATCTCTATCTCTTTCTTCTTGATCACTTTGCCAACTTCAATTTCCCAAGAAGTTGACAAACACATAGATTGTGCAAGTTCATATAGCTGTGGAGAATTATACAACATGTACTACCCTTTCTGGGGACAGAATAGACCAAGTTATTGTGGCAGCAACAAACAATTTGAGCTCAAGTGTGAGGGTCAACAAAACACTTCCATACAAACTGATTCACAAAATTTCCGAGTCTTACGTATCGATCCAACATCTTACACCATGACATTGATCAGAGAACACCTTGCCTATGATCAATGTGACTCTTCAAGATTAACCAACAATTCTTTGAGTACAAGTTTCTTCCATTACATGCCAAATGTTAGGAACATTACAATCTTCTATGATTGTCCTAACAACAGTTTGTCATATGGAAACTCTTCTTTTCCTTGTAAGGGCGAAGCGAAGAAGCGCGCTTTCTACGTGGATCGTTCTAGTACTACGGATGTTCAGAACTGCAGCCAAGGATTTAGTGTTGATGTGCAAGTGACACAGGAAATAGGGGATGAAGGTGGAATTGAAGGGCTTAATAAAGCATTGAGTTATGGATTTGTTGTGAATTATACTGCAGATTATCCAAAATGCATTGGATGCCTTAGAAGTGATGGAACTTGTGGCTCTAATGATACCTCTCAGTTTACCTGCTATTGTTCCAATGGAACTCAAGCTTTGGATTGTTCTCAAAAAAGCAATCATGTGAATTGGAAAAGGAATGTTGCTATAGCTGCTAGTGCTGCTGTAGCCAGTGCAGCTACATTGAGCATTGCCTTTTATGTCTACATTCAGCGAAAGAAGAAGAAATTTCAAGCAGTATCATCTATGTCATCTCAGACTCAGATCATGTCTTGTAGTCCTTCTTTAGAAGACCATGAGAAGGAAGGTAAACGCTTCGGACTCCGGTGCTTCACCTTTAGTGAACTTGAAGAAGCCACAGACAACTTTGATAAAGCCAGACACATAGGAGATGGAGCCTTTGGCACAGTATATTTAGGCAAACTTAAAGATGGCCGTTTCGTAGCAGTGAAAAGGATGAACGATAACAATTACAGGGGAGTTGAGCAATTCGATAATGAAGTTGAGATCATAACCGGCTTACGCCACCCAAATCTTGTGTCCATATATGGATATTGCACTTCTAGCCGCAGCCACGAACTTGTCCTTGTGTATGAATATGTTCCTAATGGAACTGTTGCTGATAATCTTTATGGTAAAAAAGCAAAGCCTGGTGCACTACCCTGGAATATTAGAATGAACATTGCCATAGAGAGTGCTGATGCATTGGCATACCTTCATGCTTCCGACATCATCCATAGAGATGTGAAAACACACAACATTCTCCTTGATGATCATTTTCGTGTCAAAGTAGCCGATTTTGGACTTTCGCGTCTAATTCCAAACAATTTCACTCACATTTCAACTGCTCCACAAGGGACACCTGGTTATGTCGATCCAGAATACCATGAGTACTATCACCTCACTGATAAGAGTGATGTCTATAGCTTCGGAGTTGTACTAATTGAGCTAATATCATCATTGCCTGCTGTTGATATCACAAGGCGAAGGCATGAAATCAATTTGTCTACCATGGCCATTAACAAGATTAGAAATACCGCATTACATGAGCTCGTGGACACAACACTTGGATTTGAGTCAGATTCCAAGGTGAGGAAAATGATCAATGCTGTGGCCGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGATGTAAGACCTTCCATGCTAGAAGTTCTGGATAGGCTTAAGGACATACAGAATGATGGGAAATATAAAAGCAAACCCGAAGTGTTGGATATATCAGAAGATGATGCTACTTTGCTGAAGAATGAACCACCACCAACATCACCAGATTTTAATGTAGTAAGCACAAATATACCATCAAATAGTGATAAATTCAACATAAGTGTAACACAGAACTTATGA 2028 0.3969 MALHMDELDHIPLFFTSIISISFFLITLPTSISQEVDKHIDCASSYSCGELYNMYYPFWGQNRPSYCGSNKQFELKCEGQQNTSIQTDSQNFRVLRIDPTSYTMTLIREHLAYDQCDSSRLTNNSLSTSFFHYMPNVRNITIFYDCPNNSLSYGNSSFPCKGEAKKRAFYVDRSSTTDVQNCSQGFSVDVQVTQEIGDEGGIEGLNKALSYGFVVNYTADYPKCIGCLRSDGTCGSNDTSQFTCYCSNGTQALDCSQKSNHVNWKRNVAIAASAAVASAATLSIAFYVYIQRKKKKFQAVSSMSSQTQIMSCSPSLEDHEKEGKRFGLRCFTFSELEEATDNFDKARHIGDGAFGTVYLGKLKDGRFVAVKRMNDNNYRGVEQFDNEVEIITGLRHPNLVSIYGYCTSSRSHELVLVYEYVPNGTVADNLYGKKAKPGALPWNIRMNIAIESADALAYLHASDIIHRDVKTHNILLDDHFRVKVADFGLSRLIPNNFTHISTAPQGTPGYVDPEYHEYYHLTDKSDVYSFGVVLIELISSLPAVDITRRRHEINLSTMAINKIRNTALHELVDTTLGFESDSKVRKMINAVAELAFQCLQSSKDVRPSMLEVLDRLKDIQNDGKYKSKPEVLDISEDDATLLKNEPPPTSPDFNVVSTNIPSNSDKFNISVTQNL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0404 675 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 655 IPR044652 -
Lan12g0404 675 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Lan12g0404 675 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0404 675 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Lan12g0404 675 Pfam Protein kinase domain 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0404 675 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 18 655 - -
Lan12g0404 675 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lan12g0404 675 Pfam Wall-associated receptor kinase C-terminal 146 248 IPR032872 -
Lan12g0404 675 Pfam Wall-associated receptor kinase galacturonan-binding 42 107 IPR025287 GO:0030247
Lan12g0404 675 Gene3D Transferase(Phosphotransferase) domain 1 421 631 - -
Lan12g0404 675 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0404 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0404 Lan-Chr12 9562559 9567602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0404 46 651 Receptor kinase-like Gene Family AT1G25390 43.639 2.77e-145 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan12g0404 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0404 - - gmx:100794703 782.326