Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan12g0404 | ATGGCCTTACACATGGATGAACTTGATCATATCCCTTTATTCTTTACATCAATTATCTCTATCTCTTTCTTCTTGATCACTTTGCCAACTTCAATTTCCCAAGAAGTTGACAAACACATAGATTGTGCAAGTTCATATAGCTGTGGAGAATTATACAACATGTACTACCCTTTCTGGGGACAGAATAGACCAAGTTATTGTGGCAGCAACAAACAATTTGAGCTCAAGTGTGAGGGTCAACAAAACACTTCCATACAAACTGATTCACAAAATTTCCGAGTCTTACGTATCGATCCAACATCTTACACCATGACATTGATCAGAGAACACCTTGCCTATGATCAATGTGACTCTTCAAGATTAACCAACAATTCTTTGAGTACAAGTTTCTTCCATTACATGCCAAATGTTAGGAACATTACAATCTTCTATGATTGTCCTAACAACAGTTTGTCATATGGAAACTCTTCTTTTCCTTGTAAGGGCGAAGCGAAGAAGCGCGCTTTCTACGTGGATCGTTCTAGTACTACGGATGTTCAGAACTGCAGCCAAGGATTTAGTGTTGATGTGCAAGTGACACAGGAAATAGGGGATGAAGGTGGAATTGAAGGGCTTAATAAAGCATTGAGTTATGGATTTGTTGTGAATTATACTGCAGATTATCCAAAATGCATTGGATGCCTTAGAAGTGATGGAACTTGTGGCTCTAATGATACCTCTCAGTTTACCTGCTATTGTTCCAATGGAACTCAAGCTTTGGATTGTTCTCAAAAAAGCAATCATGTGAATTGGAAAAGGAATGTTGCTATAGCTGCTAGTGCTGCTGTAGCCAGTGCAGCTACATTGAGCATTGCCTTTTATGTCTACATTCAGCGAAAGAAGAAGAAATTTCAAGCAGTATCATCTATGTCATCTCAGACTCAGATCATGTCTTGTAGTCCTTCTTTAGAAGACCATGAGAAGGAAGGTAAACGCTTCGGACTCCGGTGCTTCACCTTTAGTGAACTTGAAGAAGCCACAGACAACTTTGATAAAGCCAGACACATAGGAGATGGAGCCTTTGGCACAGTATATTTAGGCAAACTTAAAGATGGCCGTTTCGTAGCAGTGAAAAGGATGAACGATAACAATTACAGGGGAGTTGAGCAATTCGATAATGAAGTTGAGATCATAACCGGCTTACGCCACCCAAATCTTGTGTCCATATATGGATATTGCACTTCTAGCCGCAGCCACGAACTTGTCCTTGTGTATGAATATGTTCCTAATGGAACTGTTGCTGATAATCTTTATGGTAAAAAAGCAAAGCCTGGTGCACTACCCTGGAATATTAGAATGAACATTGCCATAGAGAGTGCTGATGCATTGGCATACCTTCATGCTTCCGACATCATCCATAGAGATGTGAAAACACACAACATTCTCCTTGATGATCATTTTCGTGTCAAAGTAGCCGATTTTGGACTTTCGCGTCTAATTCCAAACAATTTCACTCACATTTCAACTGCTCCACAAGGGACACCTGGTTATGTCGATCCAGAATACCATGAGTACTATCACCTCACTGATAAGAGTGATGTCTATAGCTTCGGAGTTGTACTAATTGAGCTAATATCATCATTGCCTGCTGTTGATATCACAAGGCGAAGGCATGAAATCAATTTGTCTACCATGGCCATTAACAAGATTAGAAATACCGCATTACATGAGCTCGTGGACACAACACTTGGATTTGAGTCAGATTCCAAGGTGAGGAAAATGATCAATGCTGTGGCCGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGATGTAAGACCTTCCATGCTAGAAGTTCTGGATAGGCTTAAGGACATACAGAATGATGGGAAATATAAAAGCAAACCCGAAGTGTTGGATATATCAGAAGATGATGCTACTTTGCTGAAGAATGAACCACCACCAACATCACCAGATTTTAATGTAGTAAGCACAAATATACCATCAAATAGTGATAAATTCAACATAAGTGTAACACAGAACTTATGA | 2028 | 0.3969 | MALHMDELDHIPLFFTSIISISFFLITLPTSISQEVDKHIDCASSYSCGELYNMYYPFWGQNRPSYCGSNKQFELKCEGQQNTSIQTDSQNFRVLRIDPTSYTMTLIREHLAYDQCDSSRLTNNSLSTSFFHYMPNVRNITIFYDCPNNSLSYGNSSFPCKGEAKKRAFYVDRSSTTDVQNCSQGFSVDVQVTQEIGDEGGIEGLNKALSYGFVVNYTADYPKCIGCLRSDGTCGSNDTSQFTCYCSNGTQALDCSQKSNHVNWKRNVAIAASAAVASAATLSIAFYVYIQRKKKKFQAVSSMSSQTQIMSCSPSLEDHEKEGKRFGLRCFTFSELEEATDNFDKARHIGDGAFGTVYLGKLKDGRFVAVKRMNDNNYRGVEQFDNEVEIITGLRHPNLVSIYGYCTSSRSHELVLVYEYVPNGTVADNLYGKKAKPGALPWNIRMNIAIESADALAYLHASDIIHRDVKTHNILLDDHFRVKVADFGLSRLIPNNFTHISTAPQGTPGYVDPEYHEYYHLTDKSDVYSFGVVLIELISSLPAVDITRRRHEINLSTMAINKIRNTALHELVDTTLGFESDSKVRKMINAVAELAFQCLQSSKDVRPSMLEVLDRLKDIQNDGKYKSKPEVLDISEDDATLLKNEPPPTSPDFNVVSTNIPSNSDKFNISVTQNL* | 676 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan12g0404 | 675 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 18 | 655 | IPR044652 | - | |
Lan12g0404 | 675 | Gene3D | Phosphorylase Kinase; domain 1 | 315 | 420 | - | - | |
Lan12g0404 | 675 | SMART | serkin_6 | 343 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan12g0404 | 675 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 616 | IPR011009 | - | |
Lan12g0404 | 675 | Pfam | Protein kinase domain | 344 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan12g0404 | 675 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 | 18 | 655 | - | - | |
Lan12g0404 | 675 | ProSitePatterns | Protein kinases ATP-binding region signature. | 349 | 371 | IPR017441 | GO:0005524 | |
Lan12g0404 | 675 | Pfam | Wall-associated receptor kinase C-terminal | 146 | 248 | IPR032872 | - | |
Lan12g0404 | 675 | Pfam | Wall-associated receptor kinase galacturonan-binding | 42 | 107 | IPR025287 | GO:0030247 | |
Lan12g0404 | 675 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 631 | - | - | |
Lan12g0404 | 675 | ProSiteProfiles | Protein kinase domain profile. | 343 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan12g0404 | 675 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 464 | 476 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan12g0404 | Lan-Chr12 | 9562559 | 9567602 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan12g0404 | 46 | 651 | Receptor kinase-like Gene Family | AT1G25390 | 43.639 | 2.77e-145 | 435 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Lan12g0404 | Pkinase | 1.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan12g0404 | - | - | gmx:100794703 | 782.326 |