Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0403 ATGATGACTCCAAACTTGAACTTGGAACCTGAAAATAATTCAGAAGATAGCAGCCAAGTAGCTTCTAATATATCCTTGCAAGAAACACCCTATGATCTTAATCTTAACCTTGATTTGACACTCAACTTTAACTCAAGTGATGGTGAGTTTAAAGGTACAAACGATGCTAGTGGTGAAGTAGAAGCTGAAGCATTAGCATCAGCGTCGGCGACAGCAACTCCTCGAGTTTTCTCTTGTAACTACTGCAGGAGAAAATTCTTTAGCTCACAGGCCTTAGGGGGTCATCAGAATGCACACAAACGGGAGAGGACAATGGCGAAGCGTGCAATGAGAATGGGAATGTTCAGTGAGAGGTATACAAGTTTAGCATCTCTACCACTTCATGGTTCACCTTTTCGGTATCATGGTATTGAAGCTCATTCCGCAATGCACCACAGTCATATGCAAATGCCATCATCACTACTAAGGGCTCCGGATATGAGAGTTGGTGCAAAATTTGAGATGAACCATTTTGGATCACCAATTTTCGTGGAAGATGATGATGTCAGTCTTTTTTGGCCTGGTAGTTTCCGAAGAGTGAACCAAGGAACTAGTGTTAATCTAGGACATGCTCAAACTTATAATACTAGTTTTATCCCAATGGCACCTCCTCCACCACAAACATCTTCATCTCCGGATCTTACTCTGAGGCTTTAA 696 0.4195 MMTPNLNLEPENNSEDSSQVASNISLQETPYDLNLNLDLTLNFNSSDGEFKGTNDASGEVEAEALASASATATPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFSERYTSLASLPLHGSPFRYHGIEAHSAMHHSHMQMPSSLLRAPDMRVGAKFEMNHFGSPIFVEDDDVSLFWPGSFRRVNQGTSVNLGHAQTYNTSFIPMAPPPPQTSSSPDLTLRL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0403 231 PANTHER ZINC FINGER PROTEIN 3-RELATED 8 231 - -
Lan12g0403 231 Gene3D Classic Zinc Finger 59 124 - -
Lan12g0403 231 MobiDBLite consensus disorder prediction 209 231 - -
Lan12g0403 231 PANTHER ZINC FINGER PROTEIN JAGGED 8 231 IPR045320 GO:0003700
Lan12g0403 231 MobiDBLite consensus disorder prediction 1 21 - -
Lan12g0403 231 SUPERFAMILY beta-beta-alpha zinc fingers 75 105 IPR036236 -
Lan12g0403 231 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Lan12g0403 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0403 Lan-Chr12 9553237 9556620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0403 71 231 C2H2 Transcription Factor Family AT1G66140 45.455 6.25e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0403 - - gmx:100775305 306.99