Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0387 ATGGATGATGATGTGCTGAACATGTCCAATTGGGGTTATTACGAACCCTTCAAAGGTGGGCATCTCGGTCTGCAGCTCATGCCTGGCATGACAGATCGCGACACGAAATCATTTTTGCCTGGTCGTGATCCATCTATGTTTGTTGGTGTGAATGATCGTGACTCGAAACCATATTCATCTGGTCGAGATTCATCTATGTTTATTGGTGCGAATGATCGTGACTCGAAACCATTTTTGTCTGGTCGTGATCCACCTATGTTTGTTGGTACAAATGATCGTGACATGAGACAATTTTTGTCTGGTCGTGATCCATCTATGCTTATTGGTGCAAATGGAAATATGCACCCACAAGATTGTGTTGTTTCGGAGGCGCTGATGCCGATGAACTATGTCAGGGGTGGTTGGATAAGCCCGAGGGATAGGTTTTTTAATTTGCCTCCTGTTACTCCTAATTATGCTGTTCTTCCAGAAACATCAGCACCTCTCTCCATGCAAACTATACAGTTACCTGATACATCAAGAGATGAAAAGGTGGATAGCATTGAAGACTCCATTGTTAAAAAGGGAGGTGGCCAATCAAAGAAAAGACAAAGTCGGGGTCCTTTATCAACTCCAGAGGCTAAGAAACCTAGGAAGCCAAAGGATAATAGCAATTCTTTAGTGCAACGAGTGAAGCCAGTGAAGAAGACTGTGGAGCTTGTTATAAATGGAATTGATATGGACTTATCTGGTCTACCCATTCCAGTTTGTTCATGCACTGGTACACCTCAGCAGTGTTATCGTTGGGGCAGTGGAGGTTGGCAATCAGCTTGTTGCACCACAAATGTGTCAATATATCCTTTGCCAATGAGCGTAAAAAGGCGTGGTGCGAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTATTAGAGAAACTTGAAGCTGAAGGTTATAATTTTGCTAACCCAATTGATCTAAGGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 1017 0.4336 MDDDVLNMSNWGYYEPFKGGHLGLQLMPGMTDRDTKSFLPGRDPSMFVGVNDRDSKPYSSGRDSSMFIGANDRDSKPFLSGRDPPMFVGTNDRDMRQFLSGRDPSMLIGANGNMHPQDCVVSEALMPMNYVRGGWISPRDRFFNLPPVTPNYAVLPETSAPLSMQTIQLPDTSRDEKVDSIEDSIVKKGGGQSKKRQSRGPLSTPEAKKPRKPKDNSNSLVQRVKPVKKTVELVINGIDMDLSGLPIPVCSCTGTPQQCYRWGSGGWQSACCTTNVSIYPLPMSVKRRGARIAGRKMSQGAFKKVLEKLEAEGYNFANPIDLRTHWARHGTNKFVTIR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0387 338 MobiDBLite consensus disorder prediction 184 223 - -
Lan12g0387 338 PANTHER BNAA06G09500D PROTEIN 92 338 - -
Lan12g0387 338 PANTHER BNAA06G09500D PROTEIN 1 51 - -
Lan12g0387 338 MobiDBLite consensus disorder prediction 201 218 - -
Lan12g0387 338 SMART GAGA_bind_2 1 338 IPR010409 -
Lan12g0387 338 Pfam GAGA binding protein-like family 1 338 IPR010409 -
Lan12g0387 338 MobiDBLite consensus disorder prediction 50 84 - -
Lan12g0387 338 PANTHER - 92 338 IPR010409 -
Lan12g0387 338 PANTHER - 1 51 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0387 Lan-Chr12 9158207 9160277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0387 1 51 BBR or BPC Transcription factor family AT2G01930 55.357 6.45e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan12g0387 GAGA_bind 3.2e-95 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0387 12 9158207 9160277 Lan1g0831 1 19082874 19085097 LSH