Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0385 ATGGAGAATAACCCACTTCAGCTTTTTCCTCATCTCACTCTAACACTCATCCTTATGATGATTATCTTATTTCCTATAATAACTGAGGAAGCTGCAGTAGTTTCATCTATCAAAACTGATGCAATGTCTCTTCTCATGTTCAAAAAGATATTAAAGGATCCAAATAGAATTCTATCAGGGTGGCAAATAGACAAGAATCCATGCACATGGTATGGAGTTTCATGCAACCAAGGAAGAGTTACTCAACTAGATCTTAGTGGCAATAGTAACTTAGTTGGAACTACTATTTCTCTTGACCCTTTATCTTCTTTAGATATGTTGTCTATTCTAAAATTGTCCTTGAATGGCTTTTCTGTAAATTCTACTTCTTTGCTTCAGTTACCATATAGTTTGACTCAACTTGATCTATCATTTGGTGGAGTTTCAGGTCCTGTTCCTGACAACTTTTTCTACAAGTGTCCAAACCTTGTTGTTGTGAATCTTTCTTATAACAACTTGACAGGTCCTATACCTGAAAAGTTCTTAACAAATTGTGATAAACTTCAAGGCCTTGACATGTCTTCAAACAATTTGACAGGCTCAATTTCTGGCCTTAAAATTGAGTGTAATTCCTTGTTGCAACTTGATCTATCTGGAAACCATTTATCAGACTCAACTCCAATCTCTTTGTCAAACTGCACTAGCCTTAAGACTTTGAACTTAGCTAATAATTTGATTTCTGGTGAAATTCCAAAGGGTTTGGGTCAGTTAAATAAGCTACAAAGTTTGGATCTTTCACATAATCAAATTACTGGTTGGATCCCTTCTGAATTGGGAAATGCATGTTCTTCACTTTTGGAAGTTAAGCTTTTCTTTAACAATATATCTGGTTCAATCCCTTATAGTTTCAGTTCTTGCACTTGGCTGCAACTTCTTGACATATCTAACAACAACATGTCTGGTCAGTTACCAGATTCTATGTTTCAGAACCTTGGATCATTGCAGGAACTGAGGTTGGGATATAATGCATTCTCTGGTCCATTTCCATCTTCAATATCTTCATGCAAGAAATTGAGGATTGTGGATTTAAGCTCAAACAAGATTTCTGGATCTATCCCTAGAGATTTATGTCCTGGTGCAGCATCACTTGAGGAGCTGAGAATGCCAGATAATCTCATAATAGGTGAAATCCCTGCTGAGTTATCAAAGTGCTCACAATTGAAGACACTTGATTTTAGTCTCAATTATCTCAATGGTTCAATCCCTGATGAGCTTGGTGAGCTTGAGAATCTTGAGAAGCTGATAGCATGGTTCAATGGCTTGGAAGGAAAAATACCACCAAAGTTGGGGCAATGCAGGAACCTTAAGGATCTTATACTGAACAATAACCAACTCAGAGGCGGAATTCCGAAAGAGTTGTTCAACTGCAGCAATCTTGAGTGGATATCACTCACAAGCAATGGACTCACCGGTGAGATACCGAGGGAGTTTGGCCTTTTGACAAGGTTAGCAGTTCTGCAGCTTGGAAACAACAATTTTACTGGTGAGATACCAGGAGAGTTGGCAAATTGCAGCAGTTTGGTATGGTTGGATTTGAACAGTAACAAGTTAACAGGCGTGATTCCACCTAGACTTGGAAGGCAGCAAGGAGAAAAATCATTGTTTGGTATCCTATCAGGTAATACATTGGTGTTTGTAAGAAATGTTGGAAACTCATGCAAAGGGGTTGGAGGTTTGTTGGAATTTTATGGAATTAGACCTGAAAGGCTCTCGCAGATTCCGACATTGAGGACTTGTGATTTAGCAAGATTGTATTCTGGTCCTGTACTCAGCCTTTTTACCAAGTACCAGACTTTGGAGTATCTTGATCTTTCATACAATGAGCTTAGAGGAAAAATCCCTGATGAATTTGGAGACATGGTGGCCTTACAGGTTCTTGAGTTATCTCACAACCAATTATCTGGTGAAATACCTTCATCACTTGGCCAACTCAAGAATTTGGGTGTGTTTGATGCATCACATAATCGGCTTCAGGGTGAAATCCCAGACTCATTCTCAAACCTCTCATTCTTGGTGCAAATTGATCTATCAAACAATGACTTAACAGGGCAAATTCCACAAAGGGGACAACTGAGTACACTTCCGGCTACACAATATGCAAACAACCCTGGTCTTTGTGGTGTTCCGTTGCCCGAATGTCAAAACGACAACAGCCAAGCCACACCAAATCCAATTGATGATTCAGGCATGAGAAGGCATAGAAGTTCGGCTTCATCTTGGGCTAACAGCATTGTCATGGGAATTCTCATCTCTGTTGCTTCTCTGTGTATCATAATTGTGTGGGCTATCGCGATGCGCGTACGGAGAAAGGAGGCTGATGAAGTGAAGATGCTTAATAGCTTGCAAGCATCACATGCTGCCACAACATGGAATATTGACAAAGAGAAAGAGCCTCTAAGTATTAATGTAGCAACATTCCAGAGGCAGCTGAGGAAGCTCAAGTTCTCTCAATTGATTGAAGCGACCAATGGTTTCTCCGCAGAAAGCCTTATTGGTTGTGGCGGCTTTGGTGAAGTTTTCAAGGCCACACTCAAGGATGGATCAAGTGTTGCAATAAAGAAGCTCATCAGACTCAGCTGCCAGGGTGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGGAAGATCAAGCATAGAAACCTTGTCCCTTTGTTGGGATACTGCAAAGTTGGTGAAGAGAGGCTCCTTGTTTACGAGTACATGGAGTATGGAAGCCTAGAAGAAATGCTTCACGGAAGGGTAAAGACGCGTGATAGACGAATTTTGACATGGGAAGAAAGGAAAAAGATTGCAAGAGGTGCTGCTAAGGGACTTTGTTTTCTGCACCACAATTGCATCCCACACATCATACATAGAGACATGAAATCAAGCAATGTGCTACTTGACCATGAATTGGAGTCAAGGGTCTCCGATTTCGGAATGGCGAGACTGATAAGTGCACTTGACACACATCTTAGTGTAAGCACACTAGCAGGAACACCAGGATATGTTCCACCAGAGTACTACCAAAGCTTCAGGTGCACTGCAAAAGGGGATGTCTACTCATTTGGGGTTGTAATGTTGGAACTGCTTACTGGAAAGCGCCCTACCGATAAAGAGGACTTCGGTGACACTAACTTGGTGGGGTGGTCCAAGATTAAGGTACGCGAAGGGAAACAAATGGAAGTAATTGACCCTGACTTGCTTTCGGTGAATCGAGGAACAGATGAAGCAGAAGTCACGGAAGTGAAAGAGATGATAAGGTATTTGGAAGTTAGTTTGCGGTGCGTTGATGACTTGCCTTCAAGAAGGCCAAATATGTTGCAGGTAGTTGCATTGCTGAGAGAGCTTATGCCTGCATCAACTGATGGAAGCAGCAATAGTGCTTGA 3408 0.4117 MENNPLQLFPHLTLTLILMMIILFPIITEEAAVVSSIKTDAMSLLMFKKILKDPNRILSGWQIDKNPCTWYGVSCNQGRVTQLDLSGNSNLVGTTISLDPLSSLDMLSILKLSLNGFSVNSTSLLQLPYSLTQLDLSFGGVSGPVPDNFFYKCPNLVVVNLSYNNLTGPIPEKFLTNCDKLQGLDMSSNNLTGSISGLKIECNSLLQLDLSGNHLSDSTPISLSNCTSLKTLNLANNLISGEIPKGLGQLNKLQSLDLSHNQITGWIPSELGNACSSLLEVKLFFNNISGSIPYSFSSCTWLQLLDISNNNMSGQLPDSMFQNLGSLQELRLGYNAFSGPFPSSISSCKKLRIVDLSSNKISGSIPRDLCPGAASLEELRMPDNLIIGEIPAELSKCSQLKTLDFSLNYLNGSIPDELGELENLEKLIAWFNGLEGKIPPKLGQCRNLKDLILNNNQLRGGIPKELFNCSNLEWISLTSNGLTGEIPREFGLLTRLAVLQLGNNNFTGEIPGELANCSSLVWLDLNSNKLTGVIPPRLGRQQGEKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFYGIRPERLSQIPTLRTCDLARLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGEIPDSFSNLSFLVQIDLSNNDLTGQIPQRGQLSTLPATQYANNPGLCGVPLPECQNDNSQATPNPIDDSGMRRHRSSASSWANSIVMGILISVASLCIIIVWAIAMRVRRKEADEVKMLNSLQASHAATTWNIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRVKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHELESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWSKIKVREGKQMEVIDPDLLSVNRGTDEAEVTEVKEMIRYLEVSLRCVDDLPSRRPNMLQVVALLRELMPASTDGSSNSA* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0385 1135 ProSiteProfiles Protein kinase domain profile. 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0385 1135 ProSiteProfiles Leucine-rich repeat profile. 252 273 IPR001611 GO:0005515
Lan12g0385 1135 Gene3D - 551 607 - -
Lan12g0385 1135 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Lan12g0385 1135 Gene3D Phosphorylase Kinase; domain 1 797 913 - -
Lan12g0385 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Lan12g0385 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 26 1123 - -
Lan12g0385 1135 Pfam Protein kinase domain 840 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0385 1135 SMART LRR_typ_2 633 657 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 493 517 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 349 372 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 250 274 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 324 348 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 518 541 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 446 469 IPR003591 -
Lan12g0385 1135 SMART LRR_typ_2 421 445 IPR003591 -
Lan12g0385 1135 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 1123 - -
Lan12g0385 1135 Gene3D Transferase(Phosphotransferase) domain 1 914 1133 - -
Lan12g0385 1135 SUPERFAMILY L domain-like 275 722 - -
Lan12g0385 1135 Gene3D Ribonuclease Inhibitor 81 726 IPR032675 -
Lan12g0385 1135 SUPERFAMILY L domain-like 40 367 - -
Lan12g0385 1135 PRINTS Leucine-rich repeat signature 181 194 - -
Lan12g0385 1135 PRINTS Leucine-rich repeat signature 250 263 - -
Lan12g0385 1135 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Lan12g0385 1135 SMART serkin_6 838 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0385 1135 SUPERFAMILY Protein kinase-like (PK-like) 819 1120 IPR011009 -
Lan12g0385 1135 Pfam Brassinosteroid receptor island domain 548 606 IPR045381 -
Lan12g0385 1135 Pfam Leucine rich repeat 605 646 IPR001611 GO:0005515
Lan12g0385 1135 Pfam Leucine rich repeat 470 530 IPR001611 GO:0005515
Lan12g0385 1135 Pfam Leucine rich repeat 205 263 IPR001611 GO:0005515
Lan12g0385 1135 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Lan12g0385 1135 Pfam Leucine rich repeat 302 361 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0385 Lan-Chr12 9113762 9117410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0385 44 1129 Receptor kinase-like Gene Family AT1G55610 48.893 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan12g0385 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0385 - - gmx:100789959 1947.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0385 12 9113762 9117410 Lan1g0830 1 19072266 19075897 LSH