Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0379 ATGGTTTTTCCAAAACCAGCTTCTGAATCAGATCTCTTTAATCTGAACTCTAATGTTGCTTTTCCTTATGCCAGGAACTCTCTTCCTAGGTATAGCATGCCTGAGAGCTCTATGCCAAAGGAGGCTGCTTACCAAAACATACATGATGAGTTGCAACTTGATGCAAATCCAAAGCTGAACTTGGCTTCCTTTGTTACCACATCCATGGAGGAAGAATGCAACAAACTCATCATGGAATCCATCAACAAAAACTACGTTGACATGGATGAGTACCCTGTTACCACTGAGCTTCATAATCGGTGTGTGAACATGATAGCAAGATTGTTCAACGCGAAAATTGGCGAAGATGAGAGCGCAATTGGAGCAGGAACAGTTGGATCGTCCGAGGCCATAATGCTAGCAGGACTTGCATTCAAGAAGAAATGGCAGAACAAACGCAAGGCTGAGGGCAAGCCCTATGATAAACCTAACATGGTCACTGGTGCTAATGTGCAGGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAGAGAAGTGAAGGTGAGTGAAGGCTACTATGTCATGGACCCTGCCAAAGCTGTTGAGATGGTAGATGAGAACACTATTTGTGTGGCTGCAATATTAGGCTCAACATATAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGATCTGTTGCTAGAAAAAAACAAGCAAACTGGATGGGATACCCCTATTCATGTGGATGCTGCTAGTGGTGGCTTTATTGCTCCTTTCCTTTATCCAGAGCTAGAATGGGATTTTAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAATATGGCCTTGTTTATGCTGGAATTGGTTGGGTTATATGGAGGACCAAGGAAGACTTGCCTGAAGACCTTGTCTTCCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACTCTGAATTTTTCTAAAGGTTCTAGTCAGATTATTGCTCAATATTATCAGCTCATTCGCCTCGGCCAAGAGGGATACCGGAGTATAATGGAGAATTGCAGAGAAAATGCTAAGGTGCTAAGGGAAGGACTAGAGAAAACAGGATGTTTTAACATACTCTCAAAGGACAATGGTGTTCCTGTGGTAGCATTTTCTCTTAAGGACAGAAGTTGTCATGACGAGTTCAAGATATCGAGGATGTTGCGTCGCCACGGCTGGATCGTGCCTGCTTATCCAATGCCACCAGCCGCTCAGCACATCAACGTGCTCCGCGTGGTGGTTAGGGCTGAGTTTTCGCGCATACTTGCCGAACGCCTTGTGTTTGACATCACAAATGTGTTACATGAACTCGAAAAACATCCCCCTAAGTACAATGCTAAAATAACCAACATTGTTAAAGAAGAGAAGGCTATGGATGATGACAATGGTGTCAAGATGAGTGCATTGGATGCACATAGAGAAATCATTGCTCAAGAATCCAATAAGCGTCCGAAAATCTTGGCTGCATAG 1494 0.4337 MVFPKPASESDLFNLNSNVAFPYARNSLPRYSMPESSMPKEAAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPVTTELHNRCVNMIARLFNAKIGEDESAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVKVSEGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAKVLREGLEKTGCFNILSKDNGVPVVAFSLKDRSCHDEFKISRMLRRHGWIVPAYPMPPAAQHINVLRVVVRAEFSRILAERLVFDITNVLHELEKHPPKYNAKITNIVKEEKAMDDDNGVKMSALDAHREIIAQESNKRPKILAA* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0379 497 Gene3D - 362 449 - -
Lan12g0379 497 CDD DOPA_deC_like 60 438 - -
Lan12g0379 497 Gene3D - 1 66 - -
Lan12g0379 497 Pfam Pyridoxal-dependent decarboxylase conserved domain 34 382 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lan12g0379 497 SUPERFAMILY PLP-dependent transferases 21 449 IPR015424 -
Lan12g0379 497 Gene3D - 67 361 IPR015421 GO:0003824
Lan12g0379 497 PANTHER GLUTAMATE DECARBOXYLASE 1 496 - -
Lan12g0379 497 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 23 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lan12g0379 497 PANTHER GLUTAMATE DECARBOXYLASE 1 496 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0379 Lan-Chr12 8963291 8967251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0379 1 485 Calmodulin-binding Proteins AT5G17330 77.459 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0379 K01580 - gmx:100782330 868.611