Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0369 ATGGTATCAACAATGAGGATTTCAAGCTCAAAACTTGCTATACTTATGCTCCTCTTGTGCTATTTTTCTTCTTTACTACAACAAGTCATTGGTCAAAGAAAAGTATTAGACAATGAAGCAACTTTAAGGGTACTATTGGAAGTTAAAAGCTCTTTTGTGGAAGACCCAGAAAATGTTCTAAGTGATTGGTCAGAGAACAACACAGACTATTGTAGTTGGAGAGGGGTCACATGTGGATTCAACTCAAACTCATTGAATCATAATGACTCTGTTCAAGTAGTGAGTCTTAACCTTTCTGACTCGTCACTCGCTGGGTCAATATCACCCTCACTCGGTCTCTTACAAAACCTGCTCCAACTAGACCTTTCATCCAACACACTTGTGGGTCCCATACCACCAAACCTCTCAAACCTCACTTCATTGGAAACTCTACTCCTCTTCTCTAACCAACTCACTGGTTATGTCCCCACCGAGTTAGGCTCACTCACGAGTCTCCGAGTCATGCGACTCGGTGACAATGAACTCACTGGCAACATTCCAGAATCACTCGGGAACCTTGTTAACCTGGTCAACCTTGGTTTGGCCTCATGCAAACTCACTGGGTCAATTCCACCCCAACTCGGTCAACTCAGTCAGTTGGAGAATCTTATTGTACAAGATAACGAGTTGATGGGTCCGATTCCAGTCGAGTTAGGGAACTGTACCAGCCTCACTGTCTTCACTGCTGCTAACAACAAACTCAACGGCTCAATCCCGAGCCAACTGAGTCAACTCACGAATCTAGAGCTTCTCAACCTTGCAAGTAACAAACTTTCCGGGGAGATACCGAGTCAACTCCGTGGGATGAGTGGACTCGTTTACTTGAACTTTATGCAGAACCAACTTGAAGGTGCTATTCCAAGGTCCTTAGCTCAAATGGGTAGCCTTCAAAATTTGGACTTGTCAATGAACAATCTCAGTGGAGGAATACCTAAGGAGTTAGGGAACATGTTTCAGTTACAATACATGGTTCTGTCTGGTAATAACCTCAGTGGTGTGATACCAAGAACTCTATGTTCCAATGCAACAAATTTGGAGCATATGATGTTGTCAGATAGTGGAATCTATGGTGAGATTCCAGCTGAATTGAATCAATGTCAATCACTGAAGCAACTTGATTTGTCAAACAATTCACTCAATGGGTCAATACCTCTTGAACTTTATGAGCTGTTTGGGTTAACTGATCTATTGCTTAATAACAACACTTTGGTTGGTACAATCTCTCCCTTCATAGGGAACCTTAGTAATTTGGAAACACTTGCTTTGTTTCACAACAATTTGCAGGGTTCTCTGCCTAGGGAGATTGGTATGCTTGGAAAGTTGGAAATTTTGTATCTTTATGATAATCAATTATCTGGGGCTATACCTGTGGAGATTGGTAATTGTTCTAGCTTGGAAATGATTGATTTCTATGGAAACCATTTCAGTGGTGAAATTCCAATCACTATTGGAAGGTTGAAAGAGTTGAATTTCCTTCACCTTAGACAGAATGAGCTTGTTGGTGAAATTCCTGCTACATTGGGCAACTGTCATCAAATGAATATCTTGGATTTGGCAGATAATCAGCTCTCAGGTGGCATCCCTGCAACATTTGGATACTTCAAGGTCTTGCAGCAGCTCATGCTTTACAACAATTCTCTTGAAGGTAACCTCCCTCACCAGCTGATAAATGTAGCAAACTTGACCAGAGTGAATCTTTCGAAGAACAGATTGAATGGTAGTGTATTTGCATTTTGTAGCTCTCGGTCGTTTCTTTCTTTCGATGTCACCGACAATGCTTTCGATGGAGAAATTCCACAGCAACTGGGAAATTCACCTTCCATAGAAAGGCTAAGATTAGGTAACAATAAATTTTCTGGTGAAATTCCAAGGACATTGGGGAAAATCCATGAGCTGACTTTGTTAGACCTCTCAGGAAATTCGCTCACAGGACCAATACCTGCCGACCTTTCTCTGTGCAATAAACTCGCGTACATTGATTTGAACAATAATAGTCTTTCTGGACAAATACCACCATGGCTAGGAAGCTTGCCTCAGTTAGGAGAACTTAAACTCTCCTTCAATAATTTTTCTGGAACTCTTCCATTAGGTCTGTTCAAATGTTCCAAATTGCTAGTTCTCTCCCTAAATGACAATTCTCTCAACGGAAGTCTCCCAGCTGATATTGGTGATCTTGCATCCCTAAATGTCCTCAGACTTGGCAACAATAAGTTATCTGGACCGATCCCATCGGAAATAGGTAAGCTGAGCACGCTTTATGAGCTTCAGATGTCTAGAAATAGCTTAAACGGTGAGATGCCAAATGAGATCGGAAAACTCCAAAATCTTCAAATCATTTTAGACCTTAGTTACAATAATCTCTCAGGTCACATCCCATCTTCTCTTGGGACTCTTTCAAAGTTAGAAGCACTTGATCTTTCTCACAATCAACTCACCGGAGAAGTCCCTCCACAACTTGGTGAAATGGGCAGTTTGGGAAAGCTTGATCTGTCTTACAACAACCTTCAAGGAAAATTGGACAAGCAGTTCTCCCATTGGCCACAAGAGGCATTTGAAGGGAACCAACATCTGTGTGGAAGCTCCATTGGGCATTGTGACGATGTTCATCATAAGGAGCAGACAGGCCTAAGTGAGTCATCGGTAGTGATAATCTCAGCGATTTCAACTTCAGCTGCAATTGCACTGTTGATACTTGCACTGAAAATCTTCTTCAAAACCAAGCAAGAATTTTTCAGGAAAGACAGTGACGTGAACTATATTTACTCTTCCTCATCATCACAAGCACAGAGAAGACCGCTGTTCCAACTAAATGCTGCTGGAAAGAGAGATCTCAGGTGGGAAGATATCATGCATGCCACCAACAACCTATGCGATGACTTCGTGATTGGCTCAGGAGGTTCGGGGACAATCTACAAAGCTGAGTTGGCCACCGGAGAGACAGTAGCCGTGAAGAAGATTTCATCAAAAGATGAATTTCTTTTAAACAAAAGCTTCATCAGAGAAGTTAAGACACTAGGAAGGATTAGGCATAGGCATCTGGTGAAGCTGATAGGTTATTGTAGCAGTAGAAACGAACATGCAGCATGGAATCTGCTGATATACGAGTACATGGAAAATGGGAGTGTATGGGATTGGCTCCATGGGAAACCAGTCAATGCAAGCAAAACGAAGAGCCTTGATTGGATGACAAGGTTCAAAATTGCGGTGGGACTAGCTCAGGGAGTAGAGTATCTCCATCATGATTGTGTACCAAAGATCATTCACAGAGACATCAAATCCAGCAACATATTGTTAGATTCCAAAATGGAGGCACATTTGGGAGATTTTGGACTAGCAAAAGCAGTGGTTGAGAATTATGACTCGAATACCGAGTCTAATTCTTTGTTTGCTGGATCTTATGGCTACATAGCTCCAGAATATGCATATTCCCTACATGCAACAGAGAAAAGTGATGTCTACAGCATGGGAATAGTGCTTATGGAACTTGTTAGTGGTAAAATGCCAACAGATGAATTTTTCGGAGCGGAGATGGATATGGTGAGATGGGTGGAGATGCACACTGAAACACATGGCTCTGCCTGTGAGGAATTGATAGATCCTGTGCTGAAACCACTTTTACCTGGTGAAGAGTTTGCTGCATTCCAAGTGCTTGAGATAGCCCTGCAGTGCACGAAAACTACACCACAGGAGAGGCCATCTTCAAGGAAAGTATGTGATCTTCTCCTCCATGTATTCAACAACAGAATGGTGGACTTTGAGAAGATGAATTTGGATCATTACAAGTGA 3825 0.4207 MVSTMRISSSKLAILMLLLCYFSSLLQQVIGQRKVLDNEATLRVLLEVKSSFVEDPENVLSDWSENNTDYCSWRGVTCGFNSNSLNHNDSVQVVSLNLSDSSLAGSISPSLGLLQNLLQLDLSSNTLVGPIPPNLSNLTSLETLLLFSNQLTGYVPTELGSLTSLRVMRLGDNELTGNIPESLGNLVNLVNLGLASCKLTGSIPPQLGQLSQLENLIVQDNELMGPIPVELGNCTSLTVFTAANNKLNGSIPSQLSQLTNLELLNLASNKLSGEIPSQLRGMSGLVYLNFMQNQLEGAIPRSLAQMGSLQNLDLSMNNLSGGIPKELGNMFQLQYMVLSGNNLSGVIPRTLCSNATNLEHMMLSDSGIYGEIPAELNQCQSLKQLDLSNNSLNGSIPLELYELFGLTDLLLNNNTLVGTISPFIGNLSNLETLALFHNNLQGSLPREIGMLGKLEILYLYDNQLSGAIPVEIGNCSSLEMIDFYGNHFSGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCHQMNILDLADNQLSGGIPATFGYFKVLQQLMLYNNSLEGNLPHQLINVANLTRVNLSKNRLNGSVFAFCSSRSFLSFDVTDNAFDGEIPQQLGNSPSIERLRLGNNKFSGEIPRTLGKIHELTLLDLSGNSLTGPIPADLSLCNKLAYIDLNNNSLSGQIPPWLGSLPQLGELKLSFNNFSGTLPLGLFKCSKLLVLSLNDNSLNGSLPADIGDLASLNVLRLGNNKLSGPIPSEIGKLSTLYELQMSRNSLNGEMPNEIGKLQNLQIILDLSYNNLSGHIPSSLGTLSKLEALDLSHNQLTGEVPPQLGEMGSLGKLDLSYNNLQGKLDKQFSHWPQEAFEGNQHLCGSSIGHCDDVHHKEQTGLSESSVVIISAISTSAAIALLILALKIFFKTKQEFFRKDSDVNYIYSSSSSQAQRRPLFQLNAAGKRDLRWEDIMHATNNLCDDFVIGSGGSGTIYKAELATGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLIGYCSSRNEHAAWNLLIYEYMENGSVWDWLHGKPVNASKTKSLDWMTRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKAVVENYDSNTESNSLFAGSYGYIAPEYAYSLHATEKSDVYSMGIVLMELVSGKMPTDEFFGAEMDMVRWVEMHTETHGSACEELIDPVLKPLLPGEEFAAFQVLEIALQCTKTTPQERPSSRKVCDLLLHVFNNRMVDFEKMNLDHYK* 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0369 1274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1099 1111 IPR008271 GO:0004672|GO:0006468
Lan12g0369 1274 Gene3D Phosphorylase Kinase; domain 1 930 1049 - -
Lan12g0369 1274 SUPERFAMILY L domain-like 595 872 - -
Lan12g0369 1274 PRINTS Leucine-rich repeat signature 382 395 - -
Lan12g0369 1274 PRINTS Leucine-rich repeat signature 811 824 - -
Lan12g0369 1274 ProSiteProfiles Protein kinase domain profile. 969 1259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0369 1274 SUPERFAMILY L domain-like 42 321 - -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 239 304 IPR032675 -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 40 160 IPR032675 -
Lan12g0369 1274 SMART LRR_typ_2 811 833 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 138 161 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 451 475 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 738 762 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 379 403 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 690 714 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 306 330 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 835 866 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 427 450 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 642 666 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 258 281 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 162 186 IPR003591 -
Lan12g0369 1274 SMART LRR_typ_2 499 523 IPR003591 -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 305 384 IPR032675 -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 161 238 IPR032675 -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 385 545 IPR032675 -
Lan12g0369 1274 Gene3D Ribonuclease Inhibitor 546 882 IPR032675 -
Lan12g0369 1274 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 14 1270 - -
Lan12g0369 1274 SUPERFAMILY RNI-like 299 632 - -
Lan12g0369 1274 SMART serkin_6 969 1259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0369 1274 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 14 1270 - -
Lan12g0369 1274 ProSitePatterns Protein kinases ATP-binding region signature. 975 998 IPR017441 GO:0005524
Lan12g0369 1274 Pfam Protein kinase domain 974 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0369 1274 Gene3D Transferase(Phosphotransferase) domain 1 1050 1271 - -
Lan12g0369 1274 SUPERFAMILY Protein kinase-like (PK-like) 955 1254 IPR011009 -
Lan12g0369 1274 Pfam Leucine rich repeat 261 319 IPR001611 GO:0005515
Lan12g0369 1274 Pfam Leucine rich repeat 793 848 IPR001611 GO:0005515
Lan12g0369 1274 Pfam Leucine rich repeat N-terminal domain 43 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0369 Lan-Chr12 8847877 8852378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0369 594 856 Receptor kinase-like Gene Family AT1G73080 35.361 1.94e-32 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan12g0369 Pkinase 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0369 - - gmx:100801889 1959.5