Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0361 ATGCCCCCTCGCCGGTGTAATCACCCACCCAACCCAACGTCATACTCCGACGACAGCGAAACCGACGATTACGACGACGACGACGACGACGAAGAAGAAGAAGGGAACTTCACCATGCGATGTATCTCTTGTGAAGAAGATTATGATCATGATGGTGCTGGAACTTGCAAAGAGTGTTACGAAGAAGCCAATGAGACTGAGGAAGAGTATAAGCGTCAGATTGAAGAGTTGAAGGCTAAGATTAACTTTCTCAAACTTTCTTCTGCTGTGGACACCACTGATGTTATTCTCATTCCTTATGGTGATTGCTCTTCTGGATGTGTTCATGCTCATAAGGCTATTCTCGTGAGTCGGTCTCCAGTTTTTAAAGCAATGCTCGAGAGTGATATGGAGGAAAGTCGAAGTGGCACTATCAAGATCGACGATGTATCTTATGATGCTCTTAGTGCCTTTGTCAACTATTTATACACTGCTGAAGCATGCCTTGATGATCAAATGGCATTTGATCTCTTAGTTTTGGCAGAAAAGTATGAGGTGAAGCATCTCAAGGCATTCTGCGAGAAGTTTTTGATCGCTCGATTGAACTTGGATAAAGCTATCGCAAACTATGCGTTCGCACACCAACACAATGCTAAACAATTACAAGATTCTGCATTGGCCTTGATTATAGACAACATGGACAGGTTCACCAGGTGTGAAGACTATGCAGATCTGAAGGACACTAATCCTCGTGTTGTTGTGGAAATTTTTGAAGCTTATCTTGCCAAACAGGTTAATACCGCTTCTCCCTTGAAGCTATAA 801 0.432 MPPRRCNHPPNPTSYSDDSETDDYDDDDDDEEEEGNFTMRCISCEEDYDHDGAGTCKECYEEANETEEEYKRQIEELKAKINFLKLSSAVDTTDVILIPYGDCSSGCVHAHKAILVSRSPVFKAMLESDMEESRSGTIKIDDVSYDALSAFVNYLYTAEACLDDQMAFDLLVLAEKYEVKHLKAFCEKFLIARLNLDKAIANYAFAHQHNAKQLQDSALALIIDNMDRFTRCEDYADLKDTNPRVVVEIFEAYLAKQVNTASPLKL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0361 266 Gene3D - 196 265 - -
Lan12g0361 266 MobiDBLite consensus disorder prediction 18 35 - -
Lan12g0361 266 CDD BACK 203 238 - -
Lan12g0361 266 CDD BTB_POZ_ZBTB_KLHL-like 93 177 - -
Lan12g0361 266 MobiDBLite consensus disorder prediction 1 36 - -
Lan12g0361 266 SUPERFAMILY POZ domain 92 191 IPR011333 -
Lan12g0361 266 PANTHER GH01369P 33 263 - -
Lan12g0361 266 Pfam BTB/POZ domain 106 192 IPR000210 GO:0005515
Lan12g0361 266 ProSiteProfiles BTB domain profile. 93 164 IPR000210 GO:0005515
Lan12g0361 266 Coils Coil 56 87 - -
Lan12g0361 266 Gene3D Potassium Channel Kv1.1; Chain A 60 195 IPR011333 -
Lan12g0361 266 PANTHER SPECKLE-TYPE POZ PROTEIN 33 263 - -
Lan12g0361 266 SMART BTB_4 93 194 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0361 Lan-Chr12 8619434 8622251 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan12g0361 BTB 4.7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0361 K10523 - pvy:116140088 295.434