Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0359 ATGGCGCAAAAGGGTCCCGCCGGAGAAGATATACACGGTGGTCGGACGGTGGTGGTTGGGGTGAAGCTCGATTCATACAGCAATGAATTGCTGACGTGGGCTTTGGCCAAAGTTGCTGAACCTGGTGATACCGTTGTTGCATTGCATGTTCTTGTCAATAATGAAACTGTGAATCTAGATGGGAAATTGTCGCTGCTTTCGCTTGTTAAAGCGTTTGATCCTGTTCTTGCTGTTTATGACGGATTATGCAATTTGAAACAGGTTGATCTCAAGCTTAAGATTCGTAAAGGTTCATCTGTGAAGAAAGTTTTGGTCCAGGAAGTGAATGCTTATGCTGCAAGTAATGTTATTGTTGGAACTTCTCAACGCCGTCATAAAATCCGGTCATCTAAATCTGTAGCTAAGTATTGTGCTAGAAAGTTATCCAAAGACTGCTGTATTCTTGCTGTCAACAACGGGAAAGTTTTGTTCAATCATTGTAGAGATGCCTCGCCATTAAATGCTGTTGTTGCTGATTTACAAGGGATTGATTGTCATTGTAGAAATGGTTTGTCTGGCTCGAATCACTGGACGCTCAATAAGAGTTCAAAAGTACTAAGTGATGACACTAAAAGCATGGATGTTGATAAGGGTGCTGGCCGAATTTCGGATAACAGTCTTGCTAAGTTATTTTTGGATTCTACAGAAACTGTTAGAAGAGAAAGCTGCTCAATTTGTGGTCCAACTCTGGCATTGCCAGACATTTCTTGCCACCAATCTGAAGAAGGGTCTTCTGGTGAAGATGGTAATGAGAATTCTTTGGCTATATTGCCCGTAAAGACCATTGGTCCAAGTCAACTTGAATTTAAACCGGGTTGGCCACTACTGCGCCAGAAAAGTTTATCAGCCAGGCAACATTTTGGTCGATCATCTTTGCGCCATATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCCTGTAGACATCTTCCATATGCTGCAGATCATGATCATAGACCGGACAACTTTGATCGAGGTCAAGATCAATATGCAGCTTTAGATAGTGAAACTGGTGCCCTTGTTGCAGTAGGTGCTGCGTCAGCGACTGCTCATTCGCATGAATACAATTCAGTCAGTATTCCAAGAGAATTGGAGGGCCTTCATGATAAATACTCAGCTACTTGCAGACTGTTTCAGTACAAAGAACTTGTTTCAGCAACATCAAATTTCTTGCCTGAAAACTTGATTGGTAAAGGAGGAAGCAGTCGGGTTTATAAAGGCTGCCTTCGTGATGGCAAGGAACTTGCTGTTAAGATCCTAAAGCCTTCTGATAATGTTTTGAATGAATTTCTTCTGGAAATAGAGATTATTACTACCTTGCATCACAAGAACATTATTTCCCTCTTCGGGTTCTGCTTTGAAAATGACAATCTTATTCTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGTAGGGAATAAGAAAAATCCAATTGTATTTGGTTGGACCGAAAGATATAAGGTAGCAATGGGTGTTGCTGAGGCTTTGGATTATCTGCATTGTAAAGATGATCAACCTGTGATCCATCGAGATGTAAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTCTGTGATTTTGGACTTGCTACATGGGCATCAGCATCGTCGTCACACATAACCTGCACAGACGTTGCTGGAACATTTGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTAACTGATAAGATCGATGTCTATGCATTTGGTGTTGTACTCCTTGAACTTCTTTCTGGGAGAAAGCCCATAAGCAATGATTATCCAAAAGGTCAAGAGAGTCTCGTTATGTGGGCAAGTCCGATTCTAGATAGTGGAAAGACGTTACAATTATTAGATCCCAGTTTCGGTGATAACTATGATCATGAAGAAATGGAAAGGATGGTCTTAGCAGCGACACTCTGTATCAGACGTGATCCGAAAGCTAGGCCTCAAATGAGCCTTATTTCGAAGATCCTTCAAGGTGATACTGATGTAATTAAGTGGGCAAGGTTAGAAGTCAATGCTTCAGAAGCACCCGAAATGCTCGACGATGAAGCTTGCGCACCAAGTAATCTACAGTCACATCTTAACCTTGCACTGCTTGATGTTGAGGATGACTCACTCTCCATGTGTAGTGTTGAGCAGAATGTGTGGTTGGAGGACTACTTGAGAGGCAGGTGGAGCTGCAGATCAAGTTTTACTGAGCACACTACTGCAAATTGTTAG 2271 0.4205 MAQKGPAGEDIHGGRTVVVGVKLDSYSNELLTWALAKVAEPGDTVVALHVLVNNETVNLDGKLSLLSLVKAFDPVLAVYDGLCNLKQVDLKLKIRKGSSVKKVLVQEVNAYAASNVIVGTSQRRHKIRSSKSVAKYCARKLSKDCCILAVNNGKVLFNHCRDASPLNAVVADLQGIDCHCRNGLSGSNHWTLNKSSKVLSDDTKSMDVDKGAGRISDNSLAKLFLDSTETVRRESCSICGPTLALPDISCHQSEEGSSGEDGNENSLAILPVKTIGPSQLEFKPGWPLLRQKSLSARQHFGRSSLRHISVVQWAMRLPCRHLPYAADHDHRPDNFDRGQDQYAALDSETGALVAVGAASATAHSHEYNSVSIPRELEGLHDKYSATCRLFQYKELVSATSNFLPENLIGKGGSSRVYKGCLRDGKELAVKILKPSDNVLNEFLLEIEIITTLHHKNIISLFGFCFENDNLILVYDFLSRGSLEENLHVGNKKNPIVFGWTERYKVAMGVAEALDYLHCKDDQPVIHRDVKSSNVLLSEDFEPQLCDFGLATWASASSSHITCTDVAGTFGYLAPEYFMYGKVTDKIDVYAFGVVLLELLSGRKPISNDYPKGQESLVMWASPILDSGKTLQLLDPSFGDNYDHEEMERMVLAATLCIRRDPKARPQMSLISKILQGDTDVIKWARLEVNASEAPEMLDDEACAPSNLQSHLNLALLDVEDDSLSMCSVEQNVWLEDYLRGRWSCRSSFTEHTTANC* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0359 756 ProSiteProfiles Protein kinase domain profile. 402 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0359 756 Gene3D Phosphorylase Kinase; domain 1 369 476 - -
Lan12g0359 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Lan12g0359 756 Gene3D HUPs 14 152 IPR014729 -
Lan12g0359 756 PANTHER - 9 732 - -
Lan12g0359 756 Pfam Universal stress protein family 15 146 IPR006016 -
Lan12g0359 756 PANTHER OS08G0249100 PROTEIN 9 732 - -
Lan12g0359 756 Pfam Protein kinase domain 406 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0359 756 SMART serkin_6 402 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0359 756 SUPERFAMILY Protein kinase-like (PK-like) 383 676 IPR011009 -
Lan12g0359 756 ProSitePatterns Protein kinases ATP-binding region signature. 408 430 IPR017441 GO:0005524
Lan12g0359 756 Gene3D Transferase(Phosphotransferase) domain 1 477 688 - -
Lan12g0359 756 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0359 Lan-Chr12 8586010 8589744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0359 389 670 Trihelix Transcription Factor Family AT1G68690 45.993 1.24e-72 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan12g0359 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0359 - - aprc:113846853 1020.76