Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0357 ATGGGCTCGTGTGGGAATTCGGCTATGGATGATGATCTCGTAGGTGGGTCTGTTATTGAGCAGAACCTGTGCTCAGAGTTACCGGTGCAGTGTGTTCCCGAGCAGCAGTCAGCTTCAAAAGAAGCCTGTGATGTGTTGGACTCTAATGTTGATCTCTCTGGTATTGATTCGGCCGGAGAGGGCCATGTGGAATCTGCAAGCTTTGTTAATGTTTCCGAGGGATCCAGGGGTGCATTGGTCAGTGAATGTAGAAATGCTGATATGGTGCTATTGGAGAATACCTCAGAAGACGATTGTCAGAATCAATTCGGGACGTATTGTGATGATGTTGAAGTTTCAGGTCTAAATAGTGGTGGGTTGTGCTCGGAAGGAGATTTTCAAAATGAAGGCAACTTGGATATTCCACCAAAGTTCGTAACTGTGATTGGCTTGCGGGAGGATTGTGTTCAACAGGGTGAGCATAAGGATGATAAGAGCAACATGTTGGCCTTAGGCGGAGATGATTCAGTGGTCATGGAAGGGAGAAACAATGGTGCCGGTTTACTTGATGATGCTTCTAATTGTGTGTCTGATTTCAGTCATTTTGAAATGTCCTTGAAATCAGAACCCATTACTCACTTGCTAGCTGATTGCAACCAGCAAAATGGTGATTTTGGTGGGAGGGAAGCCAATGCCTGCAATCAGATTTCTCCCTCACAATTTATGGAAGTGCCTTCACGTGCATTATATACAGAAGTACAGAGTGCAGGTGATCAGCAACACGATCAGAAAGATGTCGAGGATTGCAATAGTGAAGAAAAGGTTAAAGCTTTTGTTGACATAGAAAACAACTTCATTGATTCATATGCAATGAAGCACCAACACTTCACAACAGTCTCCTTAGGGAGTTCACCTGTAGTTGATTCACCTTGTGAGCCTACCCTTTTTGGTCAGGGGAGTGAAATAGAGAATAGTTTATGTCAAATTGAAGAAGATAGTTTACATGAATTGAAGAACTGTCCCACAGAGCAAACTACCAACTGTACCTTTAGAAAACCACTTTATCCTGAGACAGGCCAGCCCTCCGTTATTTTAGTCACTAGCAGCTCTTCAAAGGAAATGCCCGATCTGCTTAACAATGGTGATAATGTTCACATCAATACTAATGCTGTCAACAATCCTGAACAGGCAGATGTTGTTGAAGTTGATTGTACTGCTGAAAGAACACGGTTGCCTTCTCAAAGGAATAGTCGAAGTACAAAACTTGGCCGCAAGACACAATCCAAAAACGCTTCTAGAAAATGCAAGAACAATGCCAATGTGACACATCCAGGTGGGTGTATGGATGTTATGTCAGAGGCTGCTAGAAAGAAAAGAAGTTGTATCTCAAAACCAGCTCGTTCCTCTACGTGGGGATTGCTTGGGAACGTTGCACATTATTTTGAGCAAGATAATGAGGTTGAGGTCAGTGAAGCCATCAGCCAAGAATTGGGCAAGGCTAGAAGAAAACGTCAAAGCAGCAAAGTGATTAAAAATGGTGCAAGTTCTAGCTCATTGAATTCAGTGCAGAAGTGTTCTGCTTCAACTACTCGTGTTCGGTTGAAGGTCAAGTTTGGGAAAGAAATTGATTTAAGTCGCTCACATGTTTTGATTCCTGAGGCTTTTGATGGCTCAGCTTCTTCTTCCCACTTGGGGTCTGGTTCGGGTTCACAGAAACTAGCCAACAATGCCGAAGGTAATATTTCTGAAGTGGGCGCTTTAGGCAAGTTAGAAACTTTCAAAAATGAGCTGGACACTGATGCTATTGTTCTAAATGCACAAACTATAAACAACCACTTAGAAGGTACCACAATAACGGAGAAATCAGATGGGGATGCAGATGATTCATGTCTTATGGTTCCTCCACAGATAGAGGTTGAAGCATTGATTGAGCCAATCAATAATAAGGGTATGGATCCTGGAACTTCACCGGATTCAGAAGTTATTGATACAATTCCGGAAGACCAGGTTGGAGTAGGACATCAAGAAGATTTACATCATGCTATTTTAGGTTCCTCTAGAGAGTTCAATTCTATTTTGGATGTTAACATCACCAAGAGAGGGAAGAAGAAAGACAAGCTTATCCGTTCAAAGGATTGTATACCTGAAGACGGATCACAAGGTCTTCCAAGGAATAATAGAGCTAAGAATCGTAGACGTAAGAAGAATTTCAGTGATGCTGTTTGCTCTTCAGAATTGCCTACTTCCACTGAGATAAATGCTTCAAGGAAATCTGTAAGCTGTAAAGAATTGTCCACAGAACCATTGCCTGTTTCTGGAGAGATTGAACTCAAAGACTCCACTGAGGCTTTGAAGGTTAAGATGGAAGATAAGACAACTTGCAATCCATCCGTTGACAATGTGTTTTCAGAGTCCCCGGCTTCTGAGAATTTACTATCGTCTGGAAGATCTTCAGGCCATAAACTTCCTAAAAGTCTTTTACCAAGCGAAGTTAGCAAGACCAAATCTAAAACTTCTGACTCAACGTGCAAGAAAAAGACTACTTATAGATGCAATGAGAAGCAAAAACAGTCAACTAAGAAGAGTGGAGTCAAGCGAAAAAGTCTTTCGTCTAAAGTTAAGTGTGAATTGGAAGATCCCCCACGCACAGAAGAAAACATTGTTGAAAATCACAATTTGGATGCTGTTGGAGAAGTTAATGCCGGTGAAAACATAGTGTCAATCAATGTATCTAATTTGGACGTGGTACCTGGTGTTGGTTTGGGAGAGCAGCTATCACCACGTAATGCATGGGTGCGTTGCGATGATTGTCACAAATGGCGACGTATTCCAGCTGTGCTTGCAGACTTAATTAATGAAACAAATGGCACCTGGACATGTAATGACAACGGTGATAAAGACTTTGCTGATTGCGCTATCCCCCAGGAAATGTCAAATGCAGAGATTAATTTTGAGTTGGGAATATCAGATGAAGAAGATGCTTATGAAGACTCCAAAAATTATAAGCAATTGGAATATCGACAGCCATCGGTTTCCCAGGAGTCAACTTTTTCCCGTATCTTCACCAATGAGTTTCTGCATCGTAGCCAGATAACTCAGACTATTGATGAGGTAATGGTCTGCCATTGCAAGCCACCTCGAGAAGGCAAGTTGGGTTGTGGGGATGCATGTCTAAACCGGATACTTAACATTGAATGTGTGCAAGGAACCTGCCCATGCGGGGATCGTTGTTCCAATCAGCAGTTCCAAAAGCGTGAGTATGCCAGCCTGGATTGGTTTAAATGCGGGAAAAAAGGTTATGGACTAAAGGCACTAGAGGATATAGCTGAAGGCCAGTTTCTGATTGAATATGTTGGAGAGGTGCTTAATATGCATGCTTATGAGGCACGGCAAAGGGAGTATGCATTGAGGGGTCATAGGCATTTCTATTTTATGACCTTAGATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTTTTTGCAGTGAAGAACATCAAACAGGATGAAGAATTGACATTTGATTACAACTATGTAAGGGTTTTTGGGGCTGCTGCCAAAAAATGTTATTGTGGTTCTCCCAACTGTCGAGGTTATATAGGTGGTAATCCACTTGATGAAGAAGTGATAGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCTGTGATGGTTACTAAAGGCGGTGAAATAAAGAACAGTATGGCAGCACAGTCTGCTAGGCACATGTTAAAAGACAGGTATGTATTGAACAAGTTTACAACTTTTTTAGATGTAGATGGTACTCCAGACAAGGAGATTTGTATGAATCCTACCTCGGCTGTTTCGCTTTTGTACAGACCATCACAAATGAAAGACTCAAAGGACATGTCTTCTGTTCGAGCACAAGAAATATCTCAACAAATGGAGGATATGACAGACAAAGCCTTGCCTGATGTGCAACCAGGATATGCAATGGAATCAGAGCTTGCAGACAATAAGTCCCACACTCAACAATTAGAGTCTACTTTCCCTACAACTGGCAGCAAATTGCTACCGAACTCTACTGGTAGTAATAGGGAATCACATATGCGTGTGAAGGCTCCTAAACCAAGTGGTTCTGTTAAAAAGGGTAAGATTTGTGCTCATCCTCTAGATGGCCTCAAAGCTAGGACAGCCAACCAATCCCAGGTGTCATCTATCAAACCCAAAAATGTCGGCCAAGGAACTCCCAATGGCCGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGCGTAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAACTTTTGCTTCTCACTGTGGCATCAGGTGATAGGAGCAATGGTGAAGCAATTCAGAGCAATCGAGATCTTTCCATGATCCTTGACGCCCTTCTGAAAACAAAATCTAGAACAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACACAAAATATTGAAGCAGTACAGGCAGGACTTCAAAAAGATTCCAATACTACGAAAGCTTCTTAAGGTTATAGAGTACCTAATATCAGGCAACATATTGACATTTGAGCATATCAATAGTGGGGCCCCTTGTCATGGAATGGAGAGCTTTAGGGAATCAATGCTGTCTTTGACAGAGCATGAAGACAAACAGGTCCATCAAATTGCCCGAAGTTTCCGAGACAGATGGTTTCCTAGGCCTGTCAGAAAACACCATATGGACAGGGATGGTAATAGGGTGGAATCTCGCAGAAGCATCTACTCTAACAGATTTTCAGCATCACACAACCATCAGCATGAGCAGGATTTAAGACCAACAGAAGCAATAGATCGTGTTCACCAGTCAATGCCTGTGACAACTTCAGTAGGCGATGTTCCCCAGGAAGGCTGCTCTCCGCTATCTCAGGATGGTATTGAAAAGAAAGGGACAAAACAACGTAAGCGCAAAAGCCGATGGGATCAACCAGCAGAAACGAATTCATTTCCAAATACAGTTATTGGCTCTATTCATGGAAGCCGAAGCACTCAGGAGGATGTTCCACCAGGGTTTCCAGTTCCAGTAGGTTCATTACCTGCTCCACTGAACTCGGGTGTTCCTTCTTCACAAAATGCATGCCATACAGGATGTTCCTCCGATTCAGTCATTGTTCATCCAAAGGAGAAATTTAACTCTGGTTTGCCTGTCATGTATGGAATGCCGTTGTCTGTTGTCCAGCAATACGGAACACCTCATGCTGAAATCACAGAGAGTTGGGTCATTGCACCTGGCATGACTTTCAACTCATTTCCTCCATTACCCTCGTACCCGCGTGATGAGAAAAACTTCCGCCCTTCTAATGCTGCTAATGCTATGTCAATTGATCAGATTGCTGAAGTTAGACAGAGTGATACCAGTGGTCCAAGTATTTGTTCCTCAGATGATACGATTCTCAGGACAACTGGTGCCAACCCTGACGACATGAACCTTCCATCGGAAGAAAATGAACACACATCTAAACGATTGAAGGGTGACTCGTGTGACTTAGGAGCAACGTACTTTAGACAGCAGAAATGGAATAATCCGAAAATACATCGACCATGGTTGAGGAGGAATGCATGGAAATGTGATGTGAAGTTGAACAACTCCAGTGATGTCAGCAATATAGGTGTAGAAGATGTATCAAAAGAGTCAAATGGTGCATGTCATTCTGAGGATGCAATCTGTAGAGATGAGTAA 5781 0.425 MGSCGNSAMDDDLVGGSVIEQNLCSELPVQCVPEQQSASKEACDVLDSNVDLSGIDSAGEGHVESASFVNVSEGSRGALVSECRNADMVLLENTSEDDCQNQFGTYCDDVEVSGLNSGGLCSEGDFQNEGNLDIPPKFVTVIGLREDCVQQGEHKDDKSNMLALGGDDSVVMEGRNNGAGLLDDASNCVSDFSHFEMSLKSEPITHLLADCNQQNGDFGGREANACNQISPSQFMEVPSRALYTEVQSAGDQQHDQKDVEDCNSEEKVKAFVDIENNFIDSYAMKHQHFTTVSLGSSPVVDSPCEPTLFGQGSEIENSLCQIEEDSLHELKNCPTEQTTNCTFRKPLYPETGQPSVILVTSSSSKEMPDLLNNGDNVHINTNAVNNPEQADVVEVDCTAERTRLPSQRNSRSTKLGRKTQSKNASRKCKNNANVTHPGGCMDVMSEAARKKRSCISKPARSSTWGLLGNVAHYFEQDNEVEVSEAISQELGKARRKRQSSKVIKNGASSSSLNSVQKCSASTTRVRLKVKFGKEIDLSRSHVLIPEAFDGSASSSHLGSGSGSQKLANNAEGNISEVGALGKLETFKNELDTDAIVLNAQTINNHLEGTTITEKSDGDADDSCLMVPPQIEVEALIEPINNKGMDPGTSPDSEVIDTIPEDQVGVGHQEDLHHAILGSSREFNSILDVNITKRGKKKDKLIRSKDCIPEDGSQGLPRNNRAKNRRRKKNFSDAVCSSELPTSTEINASRKSVSCKELSTEPLPVSGEIELKDSTEALKVKMEDKTTCNPSVDNVFSESPASENLLSSGRSSGHKLPKSLLPSEVSKTKSKTSDSTCKKKTTYRCNEKQKQSTKKSGVKRKSLSSKVKCELEDPPRTEENIVENHNLDAVGEVNAGENIVSINVSNLDVVPGVGLGEQLSPRNAWVRCDDCHKWRRIPAVLADLINETNGTWTCNDNGDKDFADCAIPQEMSNAEINFELGISDEEDAYEDSKNYKQLEYRQPSVSQESTFSRIFTNEFLHRSQITQTIDEVMVCHCKPPREGKLGCGDACLNRILNIECVQGTCPCGDRCSNQQFQKREYASLDWFKCGKKGYGLKALEDIAEGQFLIEYVGEVLNMHAYEARQREYALRGHRHFYFMTLDGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFAVKNIKQDEELTFDYNYVRVFGAAAKKCYCGSPNCRGYIGGNPLDEEVIVQGDSDEEFPEPVMVTKGGEIKNSMAAQSARHMLKDRYVLNKFTTFLDVDGTPDKEICMNPTSAVSLLYRPSQMKDSKDMSSVRAQEISQQMEDMTDKALPDVQPGYAMESELADNKSHTQQLESTFPTTGSKLLPNSTGSNRESHMRVKAPKPSGSVKKGKICAHPLDGLKARTANQSQVSSIKPKNVGQGTPNGRFEAVQEKLNELLDGDGGVSKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRTVLNDIINKNGLQMLHKILKQYRQDFKKIPILRKLLKVIEYLISGNILTFEHINSGAPCHGMESFRESMLSLTEHEDKQVHQIARSFRDRWFPRPVRKHHMDRDGNRVESRRSIYSNRFSASHNHQHEQDLRPTEAIDRVHQSMPVTTSVGDVPQEGCSPLSQDGIEKKGTKQRKRKSRWDQPAETNSFPNTVIGSIHGSRSTQEDVPPGFPVPVGSLPAPLNSGVPSSQNACHTGCSSDSVIVHPKEKFNSGLPVMYGMPLSVVQQYGTPHAEITESWVIAPGMTFNSFPPLPSYPRDEKNFRPSNAANAMSIDQIAEVRQSDTSGPSICSSDDTILRTTGANPDDMNLPSEENEHTSKRLKGDSCDLGATYFRQQKWNNPKIHRPWLRRNAWKCDVKLNNSSDVSNIGVEDVSKESNGACHSEDAICRDE* 1927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0357 1926 MobiDBLite consensus disorder prediction 399 433 - -
Lan12g0357 1926 Gene3D SET domain 977 1236 IPR046341 -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1641 1687 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 786 813 - -
Lan12g0357 1926 ProSiteProfiles AWS domain profile. 1029 1079 IPR006560 GO:0005634|GO:0018024
Lan12g0357 1926 ProSiteProfiles Post-SET domain profile. 1206 1222 IPR003616 -
Lan12g0357 1926 SMART PostSET_3 1206 1222 IPR003616 -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1343 1393 - -
Lan12g0357 1926 Pfam AWS domain 1044 1078 IPR006560 GO:0005634|GO:0018024
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1661 1676 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1345 1376 - -
Lan12g0357 1926 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 403 1857 - -
Lan12g0357 1926 CDD SET_SETD2 1080 1222 IPR044437 GO:0010452|GO:0046975
Lan12g0357 1926 SUPERFAMILY SET domain 1019 1219 IPR046341 -
Lan12g0357 1926 SMART shorttest3 1029 1080 IPR006560 GO:0005634|GO:0018024
Lan12g0357 1926 ProSiteProfiles Zinc finger CW-type profile. 918 972 IPR011124 GO:0008270
Lan12g0357 1926 MobiDBLite consensus disorder prediction 402 432 - -
Lan12g0357 1926 Pfam SET domain 1092 1198 IPR001214 GO:0005515
Lan12g0357 1926 Pfam CW-type Zinc Finger 924 969 IPR011124 GO:0008270
Lan12g0357 1926 Gene3D - 915 976 - -
Lan12g0357 1926 SMART set_7 1081 1204 IPR001214 GO:0005515
Lan12g0357 1926 ProSiteProfiles SET domain profile. 1081 1198 IPR001214 GO:0005515
Lan12g0357 1926 MobiDBLite consensus disorder prediction 492 515 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1406 1421 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1406 1425 - -
Lan12g0357 1926 PANTHER SET DOMAIN PROTEINS 403 1857 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 699 740 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 1835 1856 - -
Lan12g0357 1926 MobiDBLite consensus disorder prediction 781 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0357 Lan-Chr12 8545016 8560212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0357 1064 1221 C2H2 Transcription Factor Family AT2G23740 32.787 6.81e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan12g0357 SET 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0357 - - ccaj:109797051 2224.51