Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0351 ATGAGTGCTGAAGACAGGACAAAAATGAATGACCAAACTGGTTGCTTTGATCCCAACACAATGGCAGAAAGTGAAAACTCTATGAAAGATAATAGTTTTCCTCAAACTCTGCAAAACTCACCACTTATAGTTGCAGACAATACCACAAACAGCAACTATAACAACCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAGCTTTCATATCACCACCACAATCCACAGCATTCAGAAGATCTTTCAGCCTATGCAAATGGAGTGACCCCTACATCTATGGACATCTCAAATCCACAAAATATGGCTTTGAACATGGGAAACTCTTACAACTACAACAACATGGATAATGATATGGTCCAAGAGGTTATTGATGTATATCAGCAAACTACTTGGGACACTAGTGTTCAGGAATTACAGGACATGGACTATGCTAATCAGCAAGAACACCAACAACATGAGCAACAATTTCATCAAATTGAGGCACAACATTGCAGCCAAAGCTACAATCCCTCTTCCATACTGGACCCTCCTCCTCCTTACCCTTCGACGGATCTCCTAAACTTTTTGCACTTGCCAAGATGCTCAGCTTCATCTTTGCTATCCAATCCCACCATTTGTATTCCAAACCCAATTCACAAGACACCGAACTTTCAGAATTCGATGGCCTTTCTTGGAGACCTTCCAATAGGATCCGATAACACAAGTGCGTCATCGGTTTTGTATGATCCTCTATTTCATTTGAACCTGCCTCCTCAGCCTCCAGCCCTCAGAGAGTTGTTTCAGTCTCTCCCCCGCGGATACAGCTTGCCGACCAGCTCCAGGAATGGTTCCCTTTTTGGCGGAGGGGATGAGATGGAGGGAGATGGGAGCCAGATCGACATGGGAGTGCTAGAATTCAATAGGGGTACAGTTTCTGTTGGCAAAGGAAAGGAAGGAAAAGGTACCAAACATTTCGCAACTGAGAAGCAAAGAAGAGAGCAATTGAATGGCAAATACAAAATCTTGAGGAGTCTTATCCCAAACCCCACAAAGATTGATAGAGCCTCTGTGGTGGGTGATGCCATTGAGTATATAAGAGAGCTGCTTAGAACTGTCAATGAGCTAAAATTATTGGTGGAGAAGAAAAGGTATGGGAAGGAAAGGTGCAAGAGGCATAAAGCTGAAGATGATGCTGCAGAAAGTTGCAACATAAAGCCTTTTGGTGATCCAGATGGGAACATAAGAACCTCATGGCTTCAGAGGAAATCCAAAGACAGCGAGGTTGATGTACGGATTATCGATGATGATGTTACAATCAAGCTCTTTCAGAGGAAGAAGGTTAACTGCCTGCTTTTTGTCTCCAAGGTTCTGGATGAACTTCAGTTGGAACTTCAACATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAACAGCAAGATAATTGAAGGTTCTTCAGTGTATGCAAGTGTTATAGCCAACAGGGTGATTGATGTTATGGACACTCAATATGCAGCAGCAGTTCCGCATACAAATAGCTATTAG 1530 0.4294 MSAEDRTKMNDQTGCFDPNTMAESENSMKDNSFPQTLQNSPLIVADNTTNSNYNNLEENLRLSVEELSYHHHNPQHSEDLSAYANGVTPTSMDISNPQNMALNMGNSYNYNNMDNDMVQEVIDVYQQTTWDTSVQELQDMDYANQQEHQQHEQQFHQIEAQHCSQSYNPSSILDPPPPYPSTDLLNFLHLPRCSASSLLSNPTICIPNPIHKTPNFQNSMAFLGDLPIGSDNTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTSSRNGSLFGGGDEMEGDGSQIDMGVLEFNRGTVSVGKGKEGKGTKHFATEKQRREQLNGKYKILRSLIPNPTKIDRASVVGDAIEYIRELLRTVNELKLLVEKKRYGKERCKRHKAEDDAAESCNIKPFGDPDGNIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKVNCLLFVSKVLDELQLELQHVAGGHVGEYCSFLFNSKIIEGSSVYASVIANRVIDVMDTQYAAAVPHTNSY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0351 509 Gene3D - 307 375 IPR036638 GO:0046983
Lan12g0351 509 MobiDBLite consensus disorder prediction 1 35 - -
Lan12g0351 509 CDD bHLH_AtMYC1_like 316 380 IPR045896 -
Lan12g0351 509 PANTHER TRANSCRIPTION FACTOR BHLH91 9 508 - -
Lan12g0351 509 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 360 IPR011598 GO:0046983
Lan12g0351 509 SMART finulus 317 366 IPR011598 GO:0046983
Lan12g0351 509 Pfam Helix-loop-helix DNA-binding domain 314 360 IPR011598 GO:0046983
Lan12g0351 509 PANTHER TRANSCRIPTION FACTOR BHLH91 9 508 IPR045895 GO:0006355|GO:0048658
Lan12g0351 509 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 309 373 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0351 Lan-Chr12 8399048 8401582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0351 14 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 37.175 1.10e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan12g0351 HLH 6.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0351 - - gmx:100782512 781.941