Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0343 ATGGGTTTCCGTTTAACTGCTATCCGAAGGGCATCACTTGGTGCTAGCAAAGCAACTTCAAAATGTGTAGAAGTTCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGATTTGTGATACCAATATCATACTTGAACACACCTTTATTTCAAGATTTGCTGAGTCAAGCTGAGCAAGAGTTTGGATATGATCATCCAATGGGTCGTCTCACAATTCCTTGCAGCGAATATGTCTTCCAAGATATAACTTCTCAAATTAATGGGCTTTAA 279 0.3943 MGFRLTAIRRASLGASKATSKCVEVPKGYLAVYVGEKQKRFVIPISYLNTPLFQDLLSQAEQEFGYDHPMGRLTIPCSEYVFQDITSQINGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0343 92 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
Lan12g0343 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Lan12g0343 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0343 Lan-Chr12 8305756 8306325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0343 24 83 Calmodulin-binding Proteins AT3G43120 55.000 3.82e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0343 K14488 - gmx:100806671 148.673