Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0341 ATGGGATTTCGCTTACCTGGTATTAGAAGGGTTTCATTCCAAATTGCTTCCAAAGCTATGGAAGTCCCGAAAGGGTACCTTGCAGTCTATGTTGGAGCAAAAATGAAGCGTTTTGTTATTCCAGTTTCATACTTGAATCAACCTTCATTTCAAGTGTTACTTAATGAAGCTGAAGAAGAATTTGGATATGAGCATCCAATGGGTGGCCTTACAATTCCGTGCAGGGAGGATGCTTTCTTAGACATTGCTTCTCGCTTGAATAGACTATAA 270 0.4 MGFRLPGIRRVSFQIASKAMEVPKGYLAVYVGAKMKRFVIPVSYLNQPSFQVLLNEAEEEFGYEHPMGGLTIPCREDAFLDIASRLNRL* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0341 89 Pfam Auxin responsive protein 16 85 IPR003676 GO:0009733
Lan12g0341 89 PANTHER AUXIN-INDUCED PROTEIN X10A 4 88 - -
Lan12g0341 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0341 Lan-Chr12 8279199 8279794 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0341 21 79 Calmodulin-binding Proteins AT3G43120 55.932 1.55e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0341 K14488 - gmx:100806671 150.214