Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0327 ATGGCCTCAAAATCCATAAGCTCCATTATTCATGTATCTCTTCTGGTAGCTCTCCTTGCAACTAACATTGTTTTAGCAGATGACAATGTTCCTATTCCAGCTGACAAGTCCCAATTGAACAGTTGGTACCATAATAATGTGAAACCCTTATCTCAAAGAAAGAACACCCTAGACCCAGCACTTGTTGCTGCAGAAAGTGCAACTACAGTTATCAAGGTCATGCAAGATGGTAGTGGGAATTTCAAGACTATCAATGAAGCCATTAAGAGTATTCCTAAAGGGAATACTAAATGTGTGATTGTGTACATTGGAGGTGGAACTTATAATGAGAAAATAAGGATTGAGAGGGAAAAACCTTTTATCACGTTGTATGGTGCTCCAGGGAAGATGCCAATCTTGACCTATGGGGGCACTGCTCTCAAATATGGCACTCTTGATAGTGCTACACTAAGTGTTGAATCAGATTACTTTGTGGCTTCAAATATCATAATCTCGAATTCTGCACCAAGACCTGATGGAAAGAGGAAAGGAGCCCAAGCTGTTGCATTGAGAGCTTCTGGTGACAAAGCAACATTCTATAAAGTTACACTACTAGGATTCCAAGACACATTGTGTGATGATGGAGATTGGCATATTTACAAAGATTGCTTGATTCAAGGCACTGTTGATTTTGTTTTTGGAAATGGAAAGACATTGTTTTTGAACACCGAGTTAAGAGTTCTTGGAGATGAAGGCATGTCAGTAATAACAGCACATGCAAGAGATAAGAAGACAGATGATACTGGCTACTCATTTGTCCATTGTGACGTAACTGGGACTGGGAATGGGACTCTCCTTGGAAGAGCATGGATGTCTAAATCAAAAGTTGTCTTTGCTTATTCCTATTTAGGCGCTGTTGTGAATAAGGCAGCATGGAGTAACAACTTTCACCCAGAATATGATCGAAATCTATATTTTGGAGAGTACAAGAATAAGGGACTTGGTGCAGATCTAAAAGGGCGTTACAAGTACACAAAACAACTTAGTGCTCTAGAGGCGAAACCTTTTATTACGCTTGGATACATTCAAGGTTCAAAATGGCTACTTCCTCCACCAAATCCTAGAGTGTAA 1110 0.3982 MASKSISSIIHVSLLVALLATNIVLADDNVPIPADKSQLNSWYHNNVKPLSQRKNTLDPALVAAESATTVIKVMQDGSGNFKTINEAIKSIPKGNTKCVIVYIGGGTYNEKIRIEREKPFITLYGAPGKMPILTYGGTALKYGTLDSATLSVESDYFVASNIIISNSAPRPDGKRKGAQAVALRASGDKATFYKVTLLGFQDTLCDDGDWHIYKDCLIQGTVDFVFGNGKTLFLNTELRVLGDEGMSVITAHARDKKTDDTGYSFVHCDVTGTGNGTLLGRAWMSKSKVVFAYSYLGAVVNKAAWSNNFHPEYDRNLYFGEYKNKGLGADLKGRYKYTKQLSALEAKPFITLGYIQGSKWLLPPPNPRV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0327 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Lan12g0327 369 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Lan12g0327 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Lan12g0327 369 Gene3D - 64 364 IPR012334 -
Lan12g0327 369 SUPERFAMILY Pectin lyase-like 67 362 IPR011050 -
Lan12g0327 369 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0327 Lan-Chr12 8023750 8025594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0327 11 365 Carbohydrate Esterase AT1G69940 53.911 2.30e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0327 K01051 - gmx:100775404 517.694