Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0324 ATGACCGATCAACCAATACCCACTCGCTGGTCTTTCCAGGACTTCAAAGTGTATTATGATGCGAAGTTCGGCAGGAAGAAAGTTGTGGAGAACGGTGAGAGTGATGATAAACCGGTTAGTAATGGAAATTCGGCGGACATTGTATCTAACGACAATGTGAATCCTCGAAGAACTTCGGATAGGGCTATTTATGAGCAGTTTCAAACTCAGGGGCAGAATCTGACACAGTCAAATGGTTTTTCACACAACTCCATTGATGAAAGGCCGCCAAAGTCTCTGCTTCCACCTTTTGAGAGTGCAGATATGCGGGCATTAGGAGAAAGCTTGAGTCGGGATATAATTCGCGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAGGCCGTTGTGATGCCTATCAAGTATCCCAAGTACTTTACTGGTCTGTTATCACCATGGAAAGGCATTCTCCTTTTTGGCCCCCCAGGGACAGGAAAGACTATGCTCGCAAAGGCAGTCGCAACAGAGTGCAAGACTACATTCTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCAGAAAAGTTAATTAAGGTGTTGTTTGAGCTTGCAAGGCACCATGCGCCCTCAACTATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCAGTGAACATGAAGCAAGCAGACGGTTAAAAACTGAGTTACTGATTCAGATGGATGGTTTGACTCGGACTGATGAGCTTGTTTTCGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCTATGCTCCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGTAGCGAGAAGAGAAATGTTTGAGCAACTACTTCCTCCACAGCCTGGTGAGGAACAAATCCCCCATGATTTACTCGTAGACCGAACAGAAGGATATTCAGGCTCAGATATCCGATTGCTTTGTAAAGAGACAGCTATGCAGCCCTTGAGACGCTTGGTGTCACAACTTGAACTAGAAGAAGAGGTGATACCTGAAGAAGAATTGCCTAAAGTTGGCCCAATCAGACCTGAAGATATAGAGACAGCTCTAAAGAACACAAGGCCATCTGCTCATCTCCATGCCTACAAATATGAGAAGTTCAATGATGATTATGGTAGTCAAATTCTTCAATGA 1212 0.4447 MTDQPIPTRWSFQDFKVYYDAKFGRKKVVENGESDDKPVSNGNSADIVSNDNVNPRRTSDRAIYEQFQTQGQNLTQSNGFSHNSIDERPPKSLLPPFESADMRALGESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARREMFEQLLPPQPGEEQIPHDLLVDRTEGYSGSDIRLLCKETAMQPLRRLVSQLELEEEVIPEEELPKVGPIRPEDIETALKNTRPSAHLHAYKYEKFNDDYGSQILQ* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0324 403 MobiDBLite consensus disorder prediction 72 93 - -
Lan12g0324 403 Gene3D - 118 393 IPR027417 -
Lan12g0324 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 389 IPR027417 -
Lan12g0324 403 CDD AAA 126 290 - -
Lan12g0324 403 MobiDBLite consensus disorder prediction 36 55 - -
Lan12g0324 403 Gene3D - 291 379 - -
Lan12g0324 403 SMART AAA_5 155 292 IPR003593 -
Lan12g0324 403 Pfam ATPase family associated with various cellular activities (AAA) 159 289 IPR003959 GO:0005524|GO:0016887
Lan12g0324 403 PANTHER AAA DOMAIN-CONTAINING 9 401 - -
Lan12g0324 403 Pfam AAA+ lid domain 318 351 IPR041569 -
Lan12g0324 403 MobiDBLite consensus disorder prediction 31 55 - -
Lan12g0324 403 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0324 Lan-Chr12 7967741 7975567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0324 153 358 Calmodulin-binding Proteins AT3G56690 36.744 1.60e-31 125