Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0305 ATGTTATCTCAAAAGATTAGTTTCACTATAAGCATAGTCCTTTTAATTGTGGCCACAGTTTCACATGCAGAAACAAGCTTGGAAGTTGAAATTGAAGCTTTGAAAGCTTTCAAAAACTCCATCATTCATGTCCCAAATGAAGCACTTTCAGATTGGGTTGATAGCCACCATCATTGTAACTGGAGTGGCATTGCATGTGACAAATCTACACAACATGTTACCTCAGTTTCTCTGTCTGGTCTGAATCTCCAAGGACATGTTTCACCATTCCTTGGGAACATTTCAGGTCTTCAGGTTCTTGATTTATCCTCAAATTTATTTACTGGTCATGTTCCTGTTGAGCTTAGTTTTTGCACTCAACTTTCTGAGCTATATCTTTTTGAAAATTCTCTCTCAGGTTCAATCCCTCCTGAGTTAGGAAACCTGAAAAACCTGCAGTATATGGATTTAGGTAGTAACTTCTTGAATGGAAGCATCCCTGATAGTATATTCAACTGCACTTCTTTGTTGGGTATTGCTTTCAATTTCAACAACCTTAGTGGCACAATCCCTTCAAATATAGGGAATCTAGTTAACCTTACACAGATTGCAGGGTTTGGTAATAACTTTGTTGGGTCTATACCTATTTCCATAGGTCAGTTAGGAGCTTTGCAATCTCTTGATTTTAGCCAGAACCAGTTATCAGGTGAAATACCTGCAGATATAGGAAAACTCACCAATTTAATATACCTTCTTTTGTTCACAAATTCCTTGACTGGAAAGATTCCTTCTGAGCTTGGTCAGTGTAAGAAACTTGTGTACCTTGAGTTATATGAAAATCAATTGAGTGGAAGTATACCTAATGAGCTAGGAAATTTAGTTCAGTTGGAGAAAATGAGGTTATATACTAATAAATTAAATTCCACAATACCATCTTCCATATTCAAGTTGAAAGCATTGACTCATTTAGGATTGTCAGAGAATAACTTAGAGGGAACAGTATCTTCTGATTTTGGATCTTTGAGTTCCTTACAATCTCTAACCCTGCATTTAAATAAGTTTACTGGGAATATTCCTTCATCAATAACAAACCTTACAAACTTGACATATCTTGCATTGAGCCAGAATCTCCTTTCAGGTGAAATTCCTTCGAGTATCGGTATGCTTCATAATTTGAAGCATCTAGTCTTGAACATCAACGACCTTCATGGATCGATTCCCCCGAGCATTACCAATTGTACTAGTCTGGTAAATGTCAGTTTATCTAGTAATGCCTTAACTGGTAAAATTCCGGATGGTTTTTCAAGGCTGCCTAATCTTACTTTCATGTCTCTTTCAACCAACAAACTGTCTGGGGAAATTCCAGATGACCTCTTTAACTGCTCAAAACTTAGTACTCTAAGTTTAGGACAGAACAACTTTAGTGGCTCGATCAAATCTGGTATCGGGAACTTGTTTAATCTCCAGCGTCTGCTGCTGAATACAAATTCTTTCACAGGACCAATTCCACCAGAGATTGGAAGCTTGAGTAAACTCGTCACTTTATTGCTTTCTGAAAATAAGTTTTCAGGTCAAATTCCACCAGAACTATCCAAACTTTCTCTCCTTCAGGGTCTCTCCCTCGATGACAATGTCTTAGAAGGTACAATACCTGATGAACTCACTGAAATGAAAGGTTTGACTAGACTTTTGTTGAATCAAAACAAGTTGGTTGGTCAAATACCTGAATCTATCTCAAAGCTAGAGATGCTTTCATACTTAGACCTGCATGGGAACAAGCTTAATGGATCCATTCCAAGAAAAATGGGGAAGCTTGATTTATTTTTGGATCTCTCTTACAATCAGCTCACCGGATCAATTCCCGGAGATGTCATTGCACAATTCAAAGACATGCAGATGTATCTTAATCTTTCTCACAACCAATTTGTTGGAAGTGTTCCACCTGAGCTGGGTGAATTGGAAATGATACAAGAAATTGACATTTCAAACAATAATCTTTCTGGTGTCATTCCAGAAACACTTTCTGGGTGTAGAAATCTCTTCAATATTGATTTCTCAGGAAACAATATTTCAGGCCATATTCCTGAAGAAGCTTTTATTCACATGGACTTGCTTCAAAACTTAAACCTTTCAAGAAATCATTTAGAAGGTGAAATCCCTGAAATCTTGACAGGGCTTGAGCATCTTAGTTCCCTAGACCTTTCTTCCAATCAACTTGAAGGTCCTGTACCTACTTCTGGAATATTTGCACACATCAATGCTTCTAGCATAATGGGAAACCCTGATCTTTGTGGAACAAGATTTCTAAGGCCATGCAGAGAAACTACCCATCATTCGCTATCCAAGAAGAGCATACCTATCATTGCTGCACTTGTATCTCTTGCTTTTATTCTACTTCTAGTGTTTGTGATTTTAATGCTCACGCGACGCGCCAAACTCTTCCATTCTAAACAAAGTGTTAATGGTGAGAGTTATGATCCACAGTACAGCATAGCATTGGCTCTTAAAAGATACAGTCCAAAGGAGTTAGAGATCGCCACAGGCTTTTTCAGCACGGACAAAGTCATTGGTGCTAGCAGTTTGAGCACAGTTTACAAGGGTCAACTGGAAGATAGTATGATTGTAGCCATAAAAAGATTGAACTTGCACCATTTTTCAGCAAACACTGACAAGATCTTCAAGACAGAAGCCAGCACCTTGAGCCAGCTGAAACATAGGAATTTGGTTAAGGTACTTGGATATGCTTGGGAGAGTGGGAAAATGAAGGCTTTAGTCCTAGAGTACATGGAGAATGGGAATTTGGACAATATCATACATGACAAGGAGGTGGATCAGTCTAGGTGGACATTATCCGAAAGACTCCATGTTTTCATTTCTATTGCTAGTGGGTTGGATTACTTGCACTCCGGTTACGGCTTTCCGATTGTACACTGTGATTTAAAGCCTTCTAACATCCTTTTAGATAGAGACTGGGAAGCTCATGTCAGTGATTTTGGGACAGCTAGAATACTTGGTCTTCATCTGCAGGATGGAAGTACACTTTCCTCATCAGCAGCTTTGCAAGGAACAGTTGGATATTTGGCACCAGAAATTGCCTACATAAGGAAAGTAACAACTAAAGTGGATGTGTTCAGCTTTGGTATCATAATAATGGAGTTTCTAACAAGAAGAAGGCCAACAGGACTCTTGGAAGAAGATGGCGTGCCAATCAGTCTGCGCGAAATAGTGGCAAAAGCCCTTGCAGGTGGAATGGAACAACTTGTTAAAATTTTGGACCCTATGTTGACCTGGAATGTAACGAAAGACGAAGTGGACATATTCGTAGAGCTCTTTAAGATATCCTTGTGCTGCACCCTCCCTAATCCTGAAGATAGACCTAATATGCATGATGTGCTATCTACCCTTATGAAGCTTAAAGCAGCAGCAGCAGCCAGCAGGATAGGACTAATATCTTGCTAG 3438 0.3906 MLSQKISFTISIVLLIVATVSHAETSLEVEIEALKAFKNSIIHVPNEALSDWVDSHHHCNWSGIACDKSTQHVTSVSLSGLNLQGHVSPFLGNISGLQVLDLSSNLFTGHVPVELSFCTQLSELYLFENSLSGSIPPELGNLKNLQYMDLGSNFLNGSIPDSIFNCTSLLGIAFNFNNLSGTIPSNIGNLVNLTQIAGFGNNFVGSIPISIGQLGALQSLDFSQNQLSGEIPADIGKLTNLIYLLLFTNSLTGKIPSELGQCKKLVYLELYENQLSGSIPNELGNLVQLEKMRLYTNKLNSTIPSSIFKLKALTHLGLSENNLEGTVSSDFGSLSSLQSLTLHLNKFTGNIPSSITNLTNLTYLALSQNLLSGEIPSSIGMLHNLKHLVLNINDLHGSIPPSITNCTSLVNVSLSSNALTGKIPDGFSRLPNLTFMSLSTNKLSGEIPDDLFNCSKLSTLSLGQNNFSGSIKSGIGNLFNLQRLLLNTNSFTGPIPPEIGSLSKLVTLLLSENKFSGQIPPELSKLSLLQGLSLDDNVLEGTIPDELTEMKGLTRLLLNQNKLVGQIPESISKLEMLSYLDLHGNKLNGSIPRKMGKLDLFLDLSYNQLTGSIPGDVIAQFKDMQMYLNLSHNQFVGSVPPELGELEMIQEIDISNNNLSGVIPETLSGCRNLFNIDFSGNNISGHIPEEAFIHMDLLQNLNLSRNHLEGEIPEILTGLEHLSSLDLSSNQLEGPVPTSGIFAHINASSIMGNPDLCGTRFLRPCRETTHHSLSKKSIPIIAALVSLAFILLLVFVILMLTRRAKLFHSKQSVNGESYDPQYSIALALKRYSPKELEIATGFFSTDKVIGASSLSTVYKGQLEDSMIVAIKRLNLHHFSANTDKIFKTEASTLSQLKHRNLVKVLGYAWESGKMKALVLEYMENGNLDNIIHDKEVDQSRWTLSERLHVFISIASGLDYLHSGYGFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLQDGSTLSSSAALQGTVGYLAPEIAYIRKVTTKVDVFSFGIIIMEFLTRRRPTGLLEEDGVPISLREIVAKALAGGMEQLVKILDPMLTWNVTKDEVDIFVELFKISLCCTLPNPEDRPNMHDVLSTLMKLKAAAAASRIGLISC* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0305 1145 Gene3D Phosphorylase Kinase; domain 1 806 921 - -
Lan12g0305 1145 Gene3D Ribonuclease Inhibitor 27 232 IPR032675 -
Lan12g0305 1145 Gene3D Ribonuclease Inhibitor 233 312 IPR032675 -
Lan12g0305 1145 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Lan12g0305 1145 SUPERFAMILY RNI-like 303 610 - -
Lan12g0305 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Lan12g0305 1145 ProSiteProfiles Protein kinase domain profile. 843 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0305 1145 Pfam Protein kinase domain 844 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0305 1145 SUPERFAMILY RNI-like 75 396 - -
Lan12g0305 1145 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 297 - -
Lan12g0305 1145 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 297 369 - -
Lan12g0305 1145 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 365 1132 - -
Lan12g0305 1145 SMART serkin_6 843 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0305 1145 Gene3D Ribonuclease Inhibitor 313 476 IPR032675 -
Lan12g0305 1145 Gene3D Ribonuclease Inhibitor 477 769 IPR032675 -
Lan12g0305 1145 SUPERFAMILY Protein kinase-like (PK-like) 817 1131 IPR011009 -
Lan12g0305 1145 Gene3D Transferase(Phosphotransferase) domain 1 922 1140 - -
Lan12g0305 1145 SUPERFAMILY L domain-like 540 758 - -
Lan12g0305 1145 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 1 297 - -
Lan12g0305 1145 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 297 369 - -
Lan12g0305 1145 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 365 1132 - -
Lan12g0305 1145 Pfam Leucine rich repeat 686 732 IPR001611 GO:0005515
Lan12g0305 1145 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lan12g0305 1145 Pfam Leucine rich repeat 627 683 IPR001611 GO:0005515
Lan12g0305 1145 SMART LRR_typ_2 382 406 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 286 310 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 430 454 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 646 669 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 719 744 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 502 526 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 214 238 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 695 718 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 142 166 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 94 118 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 574 598 IPR003591 -
Lan12g0305 1145 SMART LRR_typ_2 334 358 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0305 Lan-Chr12 7180729 7185056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0305 7 1139 Receptor kinase-like Gene Family AT5G46330 52.361 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan12g0305 Pkinase 5.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0305 K13420 - gmx:100817960 1663.66