Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0304 ATGGCAGCCTCAACCATGGCCCTTTCTTCCCCATCCTTGGCCGGCCAGGCGGTGAAGCTCTCCCCATCAGCTCCAGAGCTCGGAGTTGGAAGGATCTCCATGAGGAAAACTGTCACCAAGAAAGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTATGGTTGGGACACTGCTGGGCTTTCAGCTGACCCAGAGACCTTTGCCAAGAACCGTGAGTTGGAGGTGATCCACTCACGGTGGGCTATGCTTGGAGCTTTGGGAATTGTCTTCCCAGAGCTCTTGGCTCGTAACGGTGTTAAATTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGTGAGGGCGGGCTTGACTACTTGGGAAACCCAAGCTTGATCCATGCTCAGAGTATCCTTGCCATATGGGCTACACAAGTTATCTTGATGGGTGCAGTTGAGGGTTACAGAATTGCAGGTGGTCCTCTTGGAGAGGTCACTGACCCACTCTACCCCGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTAAAGAATGGAAGGTTGGCCATGTTCTCCGTGTTCGGTTTCTTTGTTCAGGCTATTGTCACTGGTAAGGGTCCATTGGAGAACCTTGCCGACCATATTGCAGACCCAGTCAACAACAATGCTTGGGCATTTGCCACCAACTTTGTCCCCGGAAACTGA 795 0.5333 MAASTMALSSPSLAGQAVKLSPSAPELGVGRISMRKTVTKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGIVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0304 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 263 IPR001344 GO:0009765|GO:0016020
Lan12g0304 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Lan12g0304 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 263 - -
Lan12g0304 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Lan12g0304 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0304 Lan-Chr12 7168578 7169550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0304 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 89.139 2.76e-172 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0304 K08912 - ccaj:109815895 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0304 12 7168578 7169550 Lan1g0807 1 18776875 18777858 LSH