Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0299 ATGTCTGATGAACCTAAACAACTTTTCTACCAGGACCTTGTACTAAATTACAATCAACAAAACACAGAAGCATCCAACATGTTCTCTGAAAAGCACTTTTCATCAGCTTATGATTCTTCATCACAAACCTTTGATCCATCTTACATGAGTTTCACTGAATGTCTTCAAGGAGGCATGGACTATAATTCACTTGCATCTTCTTTTGCCTTGTCTCCTTCCTCATCTAAGGTTTTCTCATCAATTGAAGACAATCAAAAGCCTTCAGAATTAGGAGATATTGTAGGTGTTGGTGGTGGTGGCGAAACCCTTGCAACACTTAATTCATCTATCTCTTCCTCTTCCACTGAAGCTGGGGCTGAAGAAGACTCGGGGAAGAGTAAGAAAGATGGACATGTGAAAGGAGAAGGAGGAGAAAAATCCAAGAAAGGGAATAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACAAAGAGTGAGGTTGATCACCTAGAAGATGGATACAGATGGAGAAAATATGGACAAAAAGCTGTCAAGAATAGCCCTTATCCAAGGAGCTACTACAGGTGCACAACACAGAAATGCACAGTGAAGAAACGTGTAGAGAGGTCATTTCAAGACCCAACAACTGTGGTAACAACCTATGAAGGTCAACACAATCATCCTGTTCCCACTTCTCTTAGAGGGAATGCGGCTTCTGGAATGTTCACACCTATGTTCACAACAAGTACAGCCTCGTTCCCTCAAGATCTGCTTCTTCATATGCATAATCAAAATCACCATAGCCTCATGTTCCAGAACAACAACAGCAACATCCAACAATCAATGAACACTAATACTAATGCTTCTGCAGGATCAATATATTCACACAACAATAACATTAACAACTATCTTCTTCAGCAGTTTAATAATCATCAGAATATTCCTCAGGAATATGGCCTCCTTCAAGATGTAGTTCCATCCATGTTCCTCAACAAGAGCAACCAGAATTGA 1011 0.4016 MSDEPKQLFYQDLVLNYNQQNTEASNMFSEKHFSSAYDSSSQTFDPSYMSFTECLQGGMDYNSLASSFALSPSSSKVFSSIEDNQKPSELGDIVGVGGGGETLATLNSSISSSSTEAGAEEDSGKSKKDGHVKGEGGEKSKKGNKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVVTTYEGQHNHPVPTSLRGNAASGMFTPMFTTSTASFPQDLLLHMHNQNHHSLMFQNNNSNIQQSMNTNTNASAGSIYSHNNNINNYLLQQFNNHQNIPQEYGLLQDVVPSMFLNKSNQN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0299 336 Pfam WRKY DNA -binding domain 171 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0299 336 SUPERFAMILY WRKY DNA-binding domain 162 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0299 336 MobiDBLite consensus disorder prediction 104 119 - -
Lan12g0299 336 PANTHER WRKY TRANSCRIPTION FACTOR 81 34 311 - -
Lan12g0299 336 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0299 336 MobiDBLite consensus disorder prediction 104 159 - -
Lan12g0299 336 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 311 IPR044810 GO:0003700
Lan12g0299 336 MobiDBLite consensus disorder prediction 120 159 - -
Lan12g0299 336 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0299 336 MobiDBLite consensus disorder prediction 78 97 - -
Lan12g0299 336 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0299 Lan-Chr12 7050293 7052972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0299 44 332 WRKY Transcription Factor Family AT4G18170 48.805 3.10e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan12g0299 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0299 - - gmx:100787050 394.815