Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0282 ATGGGTCTTAATGGTATTGTACCTTATCATTTGGGAAACCTCACCTTGCTTATTGAAAACAAATTCCATGGTGAGTTGCCAGAAGGACTAATAAAACTGCATAGATTGAAGTTACTCAACCTGAGCTACAATGAACTTAGTGGAAATGTTCCATTTAGAACTCATCAAACAAATATGATGAAGGCTCATCTTCACTTGCAGAAAAGAAAGTCAACCTTGAAAAATGATGGAATTTCTGATGCATTGAAGAATAAGAGAACAAGGATTGGAGGCTATGTGGACTCTCTTGAAAGAGAGTATTTTTATTTGGTAGTGCACTACTGCACTTCACCCTTTATCTTAGCTAGCAAATTCCTGACTTGCATTTGGGAGCAGCCAAAAGATGATTTTACCAGAGGAGAAAAATATAGTGAGGATGAAGATAACAACAATGTTGGTGACAACAATGATGAAGAAAAAACAGCAGATAATGATGCAGTGGATGATGATCAAGAAGAAGGAGAGTACTTATTAGGAGATGAAGATCCAACTGCTACAGAGGAGGAACTTTACAAAGGTATACTCACAAAAGATGCAGATGATAAGCATGAGCCTTCTACTAGACAATTCAGCCATGGATGCCACTTGGTCAGAGGCAAGATGGACCATGGGATGGAAGACTATATTTTTGCTCAACACAGGAATCTCAATGGTTATGATCTGGGTTTGTATGCAATATTTGATGGACATTCAGGCCGTGATGTTGCAAAGTACTTGCAAAGCCATCTATTTGAAAATATACTGAGTGAGCCTGATTTCTGGGAAAATCCTGTGCATGCTATTAAAAGAGCATGTAAAGCTACAGATGATGAGATTTTAGAAAATATAGCTGATTCGCGTGGAGGATCAACAGCTGTTGCAGCAATACTAATCAATGGTGTAAAGCTAGTGGTAGCCAATGTCGGCGATTCTCGAGCAATAGCATGCAAAAATGGTGTTGCCAAACCACTTACTGTTGATCATGAACCAGAGAAGGAGAGAGATCTTGTTGAGAGCAGGGGAGGTTTTGTGGTTACAATGCCTGGATTAGGGAACGTTCCAAGAGTGGATGGTGTATTATCAATGACACGAGCATTTGGAGATGGAAGACTGAAGGACCACATTACAGCAGAACCAGATGTAACTATTCAAAAGATTGAAGAGGACACTGAGTTCATCATTCTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAGGAAGCTTGTGACTGTATAAAGGATGTTGATGATGCTTATAAAGCATCTAAAAAGTTGGTTAAAGAAGCCAAATCTATGGGAAGCTATGACGATATTTCATGCATAGTTGTTATGTTCTAG 1359 0.3922 MGLNGIVPYHLGNLTLLIENKFHGELPEGLIKLHRLKLLNLSYNELSGNVPFRTHQTNMMKAHLHLQKRKSTLKNDGISDALKNKRTRIGGYVDSLEREYFYLVVHYCTSPFILASKFLTCIWEQPKDDFTRGEKYSEDEDNNNVGDNNDEEKTADNDAVDDDQEEGEYLLGDEDPTATEEELYKGILTKDADDKHEPSTRQFSHGCHLVRGKMDHGMEDYIFAQHRNLNGYDLGLYAIFDGHSGRDVAKYLQSHLFENILSEPDFWENPVHAIKRACKATDDEILENIADSRGGSTAVAAILINGVKLVVANVGDSRAIACKNGVAKPLTVDHEPEKERDLVESRGGFVVTMPGLGNVPRVDGVLSMTRAFGDGRLKDHITAEPDVTIQKIEEDTEFIILASDGLWKVMTNQEACDCIKDVDDAYKASKKLVKEAKSMGSYDDISCIVVMF* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0282 452 CDD PP2Cc 203 450 IPR001932 -
Lan12g0282 452 Gene3D - 187 452 IPR036457 -
Lan12g0282 452 ProSiteProfiles PPM-type phosphatase domain profile. 204 452 IPR001932 -
Lan12g0282 452 PANTHER ALPHABET, ISOFORM E-RELATED 150 452 - -
Lan12g0282 452 MobiDBLite consensus disorder prediction 132 163 - -
Lan12g0282 452 Pfam Protein phosphatase 2C 215 445 IPR001932 -
Lan12g0282 452 MobiDBLite consensus disorder prediction 132 153 - -
Lan12g0282 452 SUPERFAMILY PP2C-like 201 452 IPR036457 -
Lan12g0282 452 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 150 452 - -
Lan12g0282 452 SMART PP2C_4 194 450 IPR001932 -
Lan12g0282 452 Gene3D Ribonuclease Inhibitor 1 65 IPR032675 -
Lan12g0282 452 SUPERFAMILY L domain-like 3 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0282 Lan-Chr12 6596540 6604231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0282 201 452 PP2C-type Phosphatase Gene Family AT3G15260 58.893 2.52e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0282 - - gmx:100814772 553.132