Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0241 ATGTTGTCATCTCTACTTCCCAACCCTCCCAAACGATCTACTAAGGACAAGCACACCAAAGTAGACGGCCACAGCTGCAAAATTCGAAAGCCAGCCACCTGTGTCGCTAAGGTTTTCCAATTGACCAGAGAATTGGGACACAAGGCCAATGACAAGACCATCGAGTGGCTCCTCCAACAGGTCGAGCCCACCATCATCGCCGCCACCAACATTGGAACAACCTCAACTAATTTCCTGACCCTCAACTTGTCGATTCGCACCAGCAGAATCTCTACTTTCAAACAAGTTGAGGAAAGGGCCATAAAGGCCACTATTGCAGACTTAATGAAGACAACCATGAGAGAAGGCATAGGAGCATTTTCAACTATCAGTGGTGTTTGGATGATGGTTCTAAGGACTATTGGTGGGCTTGGCAATTCCATTGGCTATGTTGGGAGTTATGAGTGA 447 0.472 MLSSLLPNPPKRSTKDKHTKVDGHSCKIRKPATCVAKVFQLTRELGHKANDKTIEWLLQQVEPTIIAATNIGTTSTNFLTLNLSIRTSRISTFKQVEERAIKATIADLMKTTMREGIGAFSTISGVWMMVLRTIGGLGNSIGYVGSYE* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0241 148 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 89 IPR005333 GO:0003700
Lan12g0241 148 MobiDBLite consensus disorder prediction 1 23 - -
Lan12g0241 148 Pfam TCP family transcription factor 13 93 IPR017887 -
Lan12g0241 148 ProSiteProfiles TCP domain profile. 14 68 IPR017887 -
Lan12g0241 148 PANTHER TRANSCRIPTION FACTOR TCP8 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0241 Lan-Chr12 5307067 5307691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0241 11 93 TCP Transcription Factor Family AT1G72010 62.651 7.27e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan12g0241 TCP 2.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0241 - - lang:109361827 290.812