Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0237 ATGGCCACAACCGCAACCGCCGCTGCCACGTCATCATTCATCGGCACACGCCTCCGTGAAATCCAATCTAATTCGGGTCGAGTGCAGGCACGATTCGGGTTCGGGAAAAAGAAACCTGCCCCGGCGAAGAGACCGTCGACGCAGAGTACGGATCGGCCATTATGGTTTCCGGGAGCAAAGGCGCCGGAGTGGCTTGACGGAAGCCTCGTCGGAGATTACGGTTTCGATCCGTTCGGGTTGGGTAAACCTGCGGAGTACTTGCAGTTTGAGCTTGATTCTTTGGATCAGAACCTTGCGAAGAATTTGGCTGGGGATATTATTGGAACAAGGACAGAGTTTTCTGATGTGAAATCGACGCCGTTTCAGCCTTATAGTGAAGTTTTTGGGCTTCAAAGGTTTCGGGAGTGTGAGCTTATACATGGAAGGTGGGCCATGTTGGCAACGTTGGGTGCTCTTACTGTTGAGTGGCTTACCGGAGTTACATGGCAAGATGCCGGAAAGGTTGAGCTTGTAGATGGGTCATCCTACCTTGGCCAACCACTTCCATTCTCAATCACCTCATTGATTTGGATTGAAGCTCTAGTAATAGGTTACATTGAGTTCCAAAGAAATGCTGAACTTGACCCAGAAAAGAGATTGTACCCAGGTGGAAGCTTCTTTGACCCTCTTAACTTGGCCACAGATCCTGAGAAGAAAGCTAGATTGCAATTGGCTGAAATCAAACATGCACGTCTTGCAATGGTTGCTTTCCTTGGCTTTGCAGTTCAAGCTGCTGCAACTGGCAAAGGCCCTCTTAACAATTGGGCTACCCATTTGAGTGACCCTCTTCACACAACTATTATTGACACATTCTCATCCTCATCTTAA 867 0.4867 MATTATAAATSSFIGTRLREIQSNSGRVQARFGFGKKKPAPAKRPSTQSTDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSITSLIWIEALVIGYIEFQRNAELDPEKRLYPGGSFFDPLNLATDPEKKARLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0237 288 SUPERFAMILY Chlorophyll a-b binding protein 47 285 - -
Lan12g0237 288 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Lan12g0237 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 287 IPR001344 GO:0009765|GO:0016020
Lan12g0237 288 MobiDBLite consensus disorder prediction 24 53 - -
Lan12g0237 288 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 287 - -
Lan12g0237 288 Gene3D Chlorophyll a/b binding protein domain 55 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0237 Lan-Chr12 5032999 5034939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0237 1 287 Chloroplast and Mitochondria Gene Families AT3G08940 85.069 1.82e-175 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0237 K08915 - sly:101249002 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0237 12 5032999 5034939 Lan4g0750 4 9681548 9682997 PCT
Lan12g0237 12 5032999 5034939 Lan19g1044 19 17660443 17662189 PCT
Lan4g0750 4 9681548 9682997 Lan12g0237 12 5032999 5034939 PCT
Lan19g1044 19 17660443 17662189 Lan12g0237 12 5032999 5034939 PCT