Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0228 ATGGCTAAACCACAGAAAGCAAAATCAGGGTGTTTCTCTGGTTTCTTGCAAGTTCTGTGTGTTGGAAATAAAACTAGTCCTCCAGTGAATTCATCTAATCATGTTACAGAGCTAGAGAAACCAGAACTTATGCAACTTGTGCCATTAAACAAAGAAACCATTGTTGATAAATATGCAGCTACTCCTGGAGTTGTAGCAAGGTTAATGGGTTTGGATTCACTTCCAAACACTAAATTTATAACCAAAGGATCAACCCCAGATTCTGTTCCAAGAAGTAGGTCAGTGAATTTTGTTGATTACTTGGTAGAGTTTGATCTAAAACAAGCCAGCATGCACCGTAGAATGAAAACTTCTGCATCGTTTCGAGAGGTTCCTGCATTGGGTCGGAAGCAAAATCATGATCTTGTTGTGCTTTATTGGGGTGATGGTGAGAGTAGAGGTGAAGAAGATAAGTTGAAGAAAGAGGAAAAGGGTGTTAGAGAATTGAAACAGAAGAAGAAACAAGGGAGTAAGAACATGGAAATTTTGAAAGAGAAGGTTAGTAGTACTGTGAAGAAAGAATGGAACCAAGGGAAAAACAAGAAGATTTCTAAGTTGAAAAATGAACCAAGAAGGGTCCCTTCTTCTTCTTCTTCTTCTAAGCAAAGTAGAATGGTTAGAAAACATCACTGTGAAGTTAAAGATTTGTCGAATGTTTCCTCAAGCACAAATTCTTCATTGCCAAATAAGAAGAAAGGTTTTGTTGAACCAAAACTCATAGTCAACAAAAGAAACCAGAAGTCACATAAGAAGAAAATAGAGACTGAAAATAACGCAGAAAATCTCAGTCCGGTTTCTGTTCTAGATACCAATGACTACCCTTTCCTTTATGAAACCAATTTTATAGATAATAGTCATAGCACAAGCCCCTTAGCTTCAAGGTCAAAGTTGAAATCTTCATCACTAGTGTCCTTAGGTGATGATGGTGTTGAAGAGAAGACAAACAATATTAAAGGTTGCGCATACACTGACCTCAACAGGGAAGCAGAGTATTACTCAGAAGTATTCATGAAGCTTCACACTTTGACAGAAAAGGATATTAGAGAGTCAAACATCACACCAAAAAATAATGAAGGTTTTGAAGAAATCTGTTTGTTGTTTGAGGACAAAATTTTGGACCTTTTACTACATGAGTTTGTTGATGAAGTTGTAGGAATTTCAAGTTGA 1206 0.3673 MAKPQKAKSGCFSGFLQVLCVGNKTSPPVNSSNHVTELEKPELMQLVPLNKETIVDKYAATPGVVARLMGLDSLPNTKFITKGSTPDSVPRSRSVNFVDYLVEFDLKQASMHRRMKTSASFREVPALGRKQNHDLVVLYWGDGESRGEEDKLKKEEKGVRELKQKKKQGSKNMEILKEKVSSTVKKEWNQGKNKKISKLKNEPRRVPSSSSSSKQSRMVRKHHCEVKDLSNVSSSTNSSLPNKKKGFVEPKLIVNKRNQKSHKKKIETENNAENLSPVSVLDTNDYPFLYETNFIDNSHSTSPLASRSKLKSSSLVSLGDDGVEEKTNNIKGCAYTDLNREAEYYSEVFMKLHTLTEKDIRESNITPKNNEGFEEICLLFEDKILDLLLHEFVDEVVGISS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0228 401 Pfam DUF761-associated sequence motif 61 78 IPR032795 -
Lan12g0228 401 MobiDBLite consensus disorder prediction 147 202 - -
Lan12g0228 401 MobiDBLite consensus disorder prediction 147 245 - -
Lan12g0228 401 Coils Coil 145 179 - -
Lan12g0228 401 PANTHER ALC-INTERACTING PROTEIN 1 1 399 - -
Lan12g0228 401 PANTHER OS05G0128300 PROTEIN 1 399 - -
Lan12g0228 401 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0228 Lan-Chr12 4594259 4596360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0228 1 397 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.813 1.02e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0228 - - lang:109342337 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0228 12 4594259 4596360 Lan12g0228 12 4594259 4596360 ECH