Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0210 ATGACACTCTCTCCGTTACTCTCTCTTCTTTTCTATTTTCACTTCTTCCGTTCCGTTCTTTCTCTTTCCTCTGACGGACTCGCCCTTCTCTCTCTAAAGTCCTCTGTTGACCAAAATGCTGGCACCGCCGCGTTCGCCGACTGGGACGACGGCGACTCTACACCGTGTCGCTGGTCAGGCATTTCCTGCGCCAACATCTCCGACGAGCCCCATGTGGTTGGAATCGCACTTGCCGGAAAATCACTCCGCGGCTATATTCCATCGGAGTTAGGTTCCCTTCGCTACCTCCGCCGCCTCAACCTCCACGATAACGCCTTTTACGGCTTCATCCCCGTCAACCTCTTCAACGCCACCGCACTCCACAGCCTCTTCCTCCACCGCAACAACCTCTCCGGCCCCTTCCCTTCTTCCCTCTGCACCATCCCTCGCCTCGAAAACCTTGACATCTCCGGCAACTCCTTCTCCGGCGAAATTCCACAACAACTCAACAACTGTAAAAACCTCCAGAGGCTCATCCTCGCCCGTAACAACTTCTCCGGCGATATTCCGACAAGCGTATGGCCGGAGTTACAGAATCTCGTGGAACTCGATCTCTCCGCGAACGATCTAGAAGGTTCGATTCCAGAAGAAATCGGTGAACTCAAATCCCTCGCCGGAACACTAAACCTTTCTTTCAACCATCTCTCCGGTAAGATTCCGAAATCTCTCGGAAAATTACCTTCCACTGTGAGCTTCGATCTCAGTAACAATAACCTAACTGGCCAGATACCCGAAACGGGGTCGTTTTCAAACCAGGGACCTACCGCGTTTCTAAATAACCCTTCCCTCTGCGGTATCCCTCTCCGAAAACCATGCTCTAATTCGAACTCCGGTTCAGTAAATAGCACCGGTTCGAACCGTGAACCGGGTTCGAACAAAGGGTTAAGCCCCGGTTTAATTATAATTATATCAGTGGGGGATGCTGTTGGAGTAGCTTTAGTTGGGCTTGTGATTGTTTACATTTATTGGAAGAAAAAAGATTATCATAATTCTAATATTTATAATGATGAGAAAGGAAAGAGTATTAATATGTGTGATGGTAATGGTTTTCCATGCATGAATGGTGGATTTTTAATGAGTGAAGATGATGATGAAGTGGAGGGTGATGGGGGTTTAGTGAGCATTGATAAAGGTTTTAGTTTTGAGCTTGATGAGCTTTTAAGAGCTTCAGCTTATGTGTTAGGGAAAAGTGGATTGGGGATTGTGTATAAGGTTGTGTTAGGAAATGGGATGCCTGTGGCTGTGAGAAGATTGGGTGAGGGTGGAGATGAAAGGTATAAGGAGTTTGCAGCAGAGGTTATGGCCATTGGGAAGGTTAAACATCCTAATATTGTGAGGTTGAGAGCTTTTTATTGGGCACATGATGAAAAGCTTCTGATAAGTGATTTTATCAACAATGGCAATTTGGCTAATGCACTTCGAGGGAGAAATGCTCAACCATCTTCGAACCTTTCATGGTCTACAAGGCTAAGAATCGCGAAAGGAATAGCGAGGGGCTTGGCCTATCTCCATGAATGCAGTCCTAGAAAATTCGTCCATGGGGACATCAAACCCACTAATATCCTACTTGACAACGACTTCCAACCTTACATTTCGGATTTCGGCCTTAACCGGCTGATTAGCATCACTGGCAACAACCCCTCTGCCGGTGGCTTAATGGGTGGAGCTCTTCCGTATATGAAGTCATACTCATCACAAAAAGAAAGATCAAGCAACAATTACAAAGCGCCCGAGGCTCGAGTCACTTGCTGCAAACCAACCCAGAAATGGGATGTGTATTCATTAGGGGTTGTATTGCTTGAATTGCTAACTGGAAAGTCACCTGAGTCCTCTCCTACAACATCAACTTCTATGGAAGTCCCTGACTTGGTGAGGTGGGTGAGAAAAGGGTTTGATCAAAATAGCCCCTTATCGGAAATGGTTGATGCATCTCTGCTACAAGAAGTGCGTGTCAAGAAAGAGGTATTGGCTGTGTTTCATGTAGCACTAGCATGCACTGAGGGTGACCCTGAAGTCCGGCCTAGAATGAAAATTGTCTCCGAAAATGTTGAAAAGATTGGAAACTAA 2106 0.4658 MTLSPLLSLLFYFHFFRSVLSLSSDGLALLSLKSSVDQNAGTAAFADWDDGDSTPCRWSGISCANISDEPHVVGIALAGKSLRGYIPSELGSLRYLRRLNLHDNAFYGFIPVNLFNATALHSLFLHRNNLSGPFPSSLCTIPRLENLDISGNSFSGEIPQQLNNCKNLQRLILARNNFSGDIPTSVWPELQNLVELDLSANDLEGSIPEEIGELKSLAGTLNLSFNHLSGKIPKSLGKLPSTVSFDLSNNNLTGQIPETGSFSNQGPTAFLNNPSLCGIPLRKPCSNSNSGSVNSTGSNREPGSNKGLSPGLIIIISVGDAVGVALVGLVIVYIYWKKKDYHNSNIYNDEKGKSINMCDGNGFPCMNGGFLMSEDDDEVEGDGGLVSIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGMPVAVRRLGEGGDERYKEFAAEVMAIGKVKHPNIVRLRAFYWAHDEKLLISDFINNGNLANALRGRNAQPSSNLSWSTRLRIAKGIARGLAYLHECSPRKFVHGDIKPTNILLDNDFQPYISDFGLNRLISITGNNPSAGGLMGGALPYMKSYSSQKERSSNNYKAPEARVTCCKPTQKWDVYSLGVVLLELLTGKSPESSPTTSTSMEVPDLVRWVRKGFDQNSPLSEMVDASLLQEVRVKKEVLAVFHVALACTEGDPEVRPRMKIVSENVEKIGN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0210 701 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 700 - -
Lan12g0210 701 Gene3D Phosphorylase Kinase; domain 1 390 476 - -
Lan12g0210 701 Gene3D Transferase(Phosphotransferase) domain 1 477 701 - -
Lan12g0210 701 PANTHER - 6 700 - -
Lan12g0210 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Lan12g0210 701 SMART serkin_6 405 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0210 701 Pfam Protein kinase domain 406 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0210 701 ProSiteProfiles Protein kinase domain profile. 401 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0210 701 CDD STKc_IRAK 407 699 - -
Lan12g0210 701 SUPERFAMILY Protein kinase-like (PK-like) 406 692 IPR011009 -
Lan12g0210 701 Gene3D Ribonuclease Inhibitor 186 287 IPR032675 -
Lan12g0210 701 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Lan12g0210 701 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Lan12g0210 701 SUPERFAMILY L domain-like 24 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0210 Lan-Chr12 3879011 3886161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0210 20 699 Receptor kinase-like Gene Family AT1G67510 65.406 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan12g0210 Pkinase 6.9e-34 CL0016
TF S1Fa-like Lan12g0210 Pkinase 6.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0210 - - var:108346287 1019.22