Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0200 ATGGGAGGCTGTTGTAGCTGCAACGTTACCTTTGGAGAGAAGGTGTATGATATAGATTCTGAGAGTGATGACTACAATAATAAAGATACAACATATGAAGAAGGATATGGTGGGGCCCGGATCATGTTAGGAGAATCCTCTAAGTTTGTATCAATGTATTCCCAGAAGGGTAGAAAAGGAATTAATCAGGATGCATTAACGGTTTGGGAGGAATTCACAGGAGAAAAAGATATGATCTTCTGTGGTGTGTTTGATGGTCATGGTCCTCTAGGCCACAAGTTTTCACAAAGTATACGTGACAATCTACCCTCAAAGCTCTCTGCAGCATTTCAAATGGCACAACAAAATACAACTAGTTATGGAGAGAATCAACATAACATGTCGGTTGCTTCTTGGGAGGAAAGCTTCTTCAAATCCTTCATTGAAATGGATGAAGAACTTGCTTTGAAAGTTGACTATGATGGCTTTTCTGGTGGTAGCACTGCTGTCACAATCATTAAACAGAAAGACCAATTGATAATTGGTAATTTGGGGGATTCTCGTGCAGTTCTTTGCACAAGAGCAGATGATAACCATTTTGTTCCAGTTCAACTCACAGTTGACTTGAAACCAGATATTCCATGTGAAGCCTTAAGAATTGTGAATTGTGGAGGTCGAGTTTTTGCTGCAGAGGAAGATCCAGGTGTGAAGAGACTATGGATGCCTGAAGAAGATTGCCCTGGACTAGCTATGTCAAGAGCCTTCGGAGATTTTTGCCTGAAAAATTGTGGTCTCACCTCAATTCCTGACTTAGTTTATCGAAAAATTAACAAGCAGGATCAGTTTGTGGTTTTGGCCACTGATGGGGTATGGGATGTGCTAACAAACAATGAAGTAATAACCATAGTTGCTTCAGCACCAAAGCGGTCGATGGCAGCAAAAATTTTAGTAAAGCGCGCTGTTCAGGCCTGGAGATACAAGTATCCTTCTTCTGGGGTTGATGATTGTGCAGTCATATGCTTATTCCTGAATAATTAA 1017 0.4081 MGGCCSCNVTFGEKVYDIDSESDDYNNKDTTYEEGYGGARIMLGESSKFVSMYSQKGRKGINQDALTVWEEFTGEKDMIFCGVFDGHGPLGHKFSQSIRDNLPSKLSAAFQMAQQNTTSYGENQHNMSVASWEESFFKSFIEMDEELALKVDYDGFSGGSTAVTIIKQKDQLIIGNLGDSRAVLCTRADDNHFVPVQLTVDLKPDIPCEALRIVNCGGRVFAAEEDPGVKRLWMPEEDCPGLAMSRAFGDFCLKNCGLTSIPDLVYRKINKQDQFVVLATDGVWDVLTNNEVITIVASAPKRSMAAKILVKRAVQAWRYKYPSSGVDDCAVICLFLNN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0200 338 CDD PP2Cc 49 336 IPR001932 -
Lan12g0200 338 Pfam Protein phosphatase 2C 73 313 IPR001932 -
Lan12g0200 338 SUPERFAMILY PP2C-like 47 338 IPR036457 -
Lan12g0200 338 Gene3D - 44 338 IPR036457 -
Lan12g0200 338 SMART PP2C_4 39 334 IPR001932 -
Lan12g0200 338 PANTHER ALPHABET, ISOFORM E-RELATED 1 338 - -
Lan12g0200 338 ProSiteProfiles PPM-type phosphatase domain profile. 49 336 IPR001932 -
Lan12g0200 338 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0200 Lan-Chr12 3472538 3476381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0200 1 338 PP2C-type Phosphatase Gene Family AT5G01700 51.558 1.70e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0200 - - gmx:100783603 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0200 12 3472538 3476381 Lan12g0200 12 3472538 3476381 ECH