Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0198 ATGTCTTTCAGTTTCACTAATGATCTTTTTTCCAACTACAACACTAACCTGGACTTGGATGATAAATGGGGAACTCCTCAACCTAAAAATGATGATCATACTGGACTTGAAGTTCCTACATATTCATATATGTCTTTTCCACATAGTTTCAGCCCAACTAATTTGATGCATCATTCACCACTGTTTCATTCATCTCCCAATATTCATGCATCTAATCCAATTGATGAGTCTTGCTTCAACTGGAGCAAGAGTTCAAGTGAGGAACAACAACAACTTAACAAGAAGGAAGAGAAAAACTACAGTGACATATATATTCAAGCTCAAACTAACCATGAGAATCTCTTACACTCATCCTCAAGCATGCTTCAAGCGGAACCGCAAGAGAAACAATACACATGTCAATTCAATGAACCTGCAAAGCAAACCAAATTTTCATCTCAGAAGACAATAATCAAATCTGAATATCCATCCACACAGAACTTCTCCTCAGATATGGCCACAACCAAAACTGCATTGCATAGTAATTCTGCTCCTGGAACTGGTTATTTTAACTGCACTAAAGCTTCTCTAACTGTTAGAGAACAAAGTAGAACAGAAGATGGATACAAGTGGAGGAAATACGGCGAAAAACAAGTGAAAGGAAGCGAAAATCCTCGCAGTTATTACAAGTGCACACATCAAAATTGTTCAATGAAGAAGAAAGTTGAGAAGTCTTTGGAAGGAGGACATATTACTGAGATAGTATATAAGGGAAGTCACAACCATCCTAAGCCCCAGTCCACTAAAAGAACATGTTCTCAGTCATTTCTTCAACTTTCTTCATCCTGTGCCAATTCAGGAATATCTCATCAATCTATGGGAGAGGAAGATTTTGAGCAAACTTCACAAACAAGTTATTCTTGGGGAGATAATGATAACCTCGGACCTGATGCGAAAAGATGGAAGGGAGAGAATGAAAATGATGGCTATTCTACCTCTGGTAGTAGAACAGTTAAGGAGCCTAGAGTTGTAGTTCAAACGACAAGCGAAATCGATATACTCGATGATGGATACAGGTGGAGAAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGCTACTATAAATGTGTAACCCAGGGTTGTTCAGTGAGAAAACTCGTTGAGCGCGCCGCACACGATACGAAAGCTGTAATCACAACATATGAAGGGAAACACAACCATGATGTACCTGTAGGACGTGGAAGTTCAGGCTACAGCATGAACAGAACTTCTCAGAACAGCAACACTAGTAATGTTAATGCCCATATAAGGCCCTCAGTAAGTTTCACAAATTCACTTCATGATACAAAGCTACCTTGGTCTACAAGTCAAGAACCTTCTACTCTGGACATGTTGCTGAGCCCAGGAAGCTTCGGGTTTTCGGGTTTTGGCAGATCAATGGGTTCATTTACTGGCCATGAACAATACTCAGATGACAAGAAGGATGATTCATTCCTACAGTCATTTCTGTCAAACAAATTTTAA 1515 0.3934 MSFSFTNDLFSNYNTNLDLDDKWGTPQPKNDDHTGLEVPTYSYMSFPHSFSPTNLMHHSPLFHSSPNIHASNPIDESCFNWSKSSSEEQQQLNKKEEKNYSDIYIQAQTNHENLLHSSSSMLQAEPQEKQYTCQFNEPAKQTKFSSQKTIIKSEYPSTQNFSSDMATTKTALHSNSAPGTGYFNCTKASLTVREQSRTEDGYKWRKYGEKQVKGSENPRSYYKCTHQNCSMKKKVEKSLEGGHITEIVYKGSHNHPKPQSTKRTCSQSFLQLSSSCANSGISHQSMGEEDFEQTSQTSYSWGDNDNLGPDAKRWKGENENDGYSTSGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVTQGCSVRKLVERAAHDTKAVITTYEGKHNHDVPVGRGSSGYSMNRTSQNSNTSNVNAHIRPSVSFTNSLHDTKLPWSTSQEPSTLDMLLSPGSFGFSGFGRSMGSFTGHEQYSDDKKDDSFLQSFLSNKF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0198 504 SUPERFAMILY WRKY DNA-binding domain 192 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 SMART WRKY_cls 198 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 SMART WRKY_cls 347 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 502 IPR044810 GO:0003700
Lan12g0198 504 Gene3D WRKY domain 332 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 Gene3D WRKY domain 184 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 MobiDBLite consensus disorder prediction 280 304 - -
Lan12g0198 504 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 Pfam WRKY DNA -binding domain 348 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 SUPERFAMILY WRKY DNA-binding domain 339 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 ProSiteProfiles WRKY domain profile. 342 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 ProSiteProfiles WRKY domain profile. 193 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan12g0198 504 MobiDBLite consensus disorder prediction 280 329 - -
Lan12g0198 504 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 42 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0198 Lan-Chr12 3437468 3441629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0198 184 471 WRKY Transcription Factor Family AT2G38470 56.481 1.41e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan12g0198 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0198 K13424 - gmx:100127367 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0198 12 3437468 3441629 Lan12g0198 12 3437468 3441629 ECH