Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0189 ATGGCTTCAAGTTCTCATCTAATGGTGACTTTGTCTCACTTAAAACTAAGAATGGGTTTGTTCTTTTGTGTTTTTGGGATAGCTTTTGCACAGTTACAACCAATTACATTTTATGACTCACATTGTCCTGGAGCACTTGTTACCATTAAGAAATCAATAAGCCTTGCTGTGTTAAAGGATCGTCGAATGGGTGCATCCTTGCTCCGACTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCTGTATTGTTAAAAGATACACTACATTTCACTGGAGAACAAAATGCTTTTCCCAACATGAACTCTCTTAGGGGTTTCGATGTCATAGAGAACATAAAATATAAATTAGAGACCTTGTGCCCTGGTGTGTTCTCTTGCGCAGACATTTTAGCAGTTGCAGCTAAGGAATCAGTTGTTGCTCTTGGAGGACTAGGTTGGCATGTTAGCTTGGGCAGAAGAGACTCAACCACTGCAAGTTTACGTGGTGCTAATTCAGACTTGCCCGGTCCCTTTTTAGATCTTGGTGGCCTCATCAGTGGTTTTGCAAAAAAGGGTTTCACAGCACAAGAAATGGTTGCTTTATCAGGTGCTCACACCATAGGCAAAGGGAGGTGTAGATTCTTCAAAACAAGGATTTACAATGAAAGCAACATAGATCCCTCTTTTGCAAAATCATTGAAAGGAAATTGTCCCAAAACAGGTGGTGATGATAATTTTTCCTCTCTTGACAACTCCACATCTGCAGACCTTTTTGACAGTGGTTATTACAAGAGTTTAGTTAACAAAAAGGGTCTTTTTCACTCCGACCAACAACTCTTTAATGGTGGTTTCACAAAATCCCAAGTTCTGAATTACACCACCAACTCAACCCTCTTTCAAAATGACTTTGCTAAGGCAATGGAAAAGATGGGAAAACTAAGCCCACTAATAGGCACCAAAGGCCAGATAAGAAAACAATGCAGTAGAGTCAATTGA 981 0.3996 MASSSHLMVTLSHLKLRMGLFFCVFGIAFAQLQPITFYDSHCPGALVTIKKSISLAVLKDRRMGASLLRLHFHDCFVQGCDASVLLKDTLHFTGEQNAFPNMNSLRGFDVIENIKYKLETLCPGVFSCADILAVAAKESVVALGGLGWHVSLGRRDSTTASLRGANSDLPGPFLDLGGLISGFAKKGFTAQEMVALSGAHTIGKGRCRFFKTRIYNESNIDPSFAKSLKGNCPKTGGDDNFSSLDNSTSADLFDSGYYKSLVNKKGLFHSDQQLFNGGFTKSQVLNYTTNSTLFQNDFAKAMEKMGKLSPLIGTKGQIRKQCSRVN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0189 326 PANTHER PEROXIDASE 72-RELATED 28 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 CDD secretory_peroxidase 31 325 IPR033905 GO:0004601|GO:0042744
Lan12g0189 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lan12g0189 326 Gene3D - 36 323 - -
Lan12g0189 326 Gene3D Peroxidase, domain 2 170 305 - -
Lan12g0189 326 ProSiteProfiles Plant heme peroxidase family profile. 37 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PANTHER PEROXIDASE 28 326 - -
Lan12g0189 326 Pfam Peroxidase 50 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Lan12g0189 326 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 SUPERFAMILY Heme-dependent peroxidases 35 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan12g0189 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0189 Lan-Chr12 3067499 3071198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0189 27 326 Peroxidase AT5G05340 54.636 1.79e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0189 K00430 - gmx:100815142 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0189 12 3067499 3071198 Lan12g0189 12 3067499 3071198 ECH
Lan7g1415 7 19675220 19677026 Lan12g0189 12 3067499 3071198 PCT
Lan13g1189 13 17521379 17524316 Lan12g0189 12 3067499 3071198 PCT