Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0185 ATGGAACCGAAAGGAAGTGTGCTTATGCAGCGATATGAGCTAGGGAAATTATTAGGCCAAGGAACCTTTGCAAAGGTATATCATGCGAGAAACATTATAACTGGCATGAGTGTGGCCATTAAAATGATTGATAAAGATAAGGTTTTGAGTGTTGGGATGATTGAACAGATTAAGCGTGAAATTTCAGTAATGAGACTAATCAAACATCCAAATGTGGTTGAGCTTTATGAGGTAATGGCCAGCAAAGCCAAAATATACTTTGTCATGGAGTATGTAAAAGGTGGTGAGCTCTTCAACAAGGTAGCCAAAGGAAAACTCAACCAGGATGTTGCTAGGAAATATTTTCAGCAATTGATCAGTGCTGTTGACTACTGCCACAGCAGAGGTGTGTGTCATCGCGATCTAAAACCAGAAAATCTTTTATTGGATGAAAATGGAAATTTGAAGGTTTCAGATTTTGGATTGAGTGCTCTGGCTGAATCTAAGCACCAAGATGGATTGCTTCATACTACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAAGGGTTATGATGGGGCCAAAGCTGATATCTGGTCATGTGGTGTTATCTTGTACGTTCTATTGGCCGGTTTTCTTCCGTTCAGAGATTCAAATCTGATGGAGATGTACAGGAAGATTGGTAAGGGAGACTTCAAATTTCCTAACTGGTTTGCTTCAGATGTACGGAGATTGTTATCCAGAATCTTGGATCCAAACCCAAAAACGAGGATATCAGCGGCCAAAATTATGGAAAGTTCTTGGTTCAAAAGGGGGCTAGTGAAGCCTACTGTTATTGCCAACGATGACAAAGAACTAGCTCCTATGGATGCTGATGGAGTATTTGGAGCTTATGAGAATGATACTCCTGTAGCAGAGTCAATGCATGAACTGTCAAAACCTTGCAATTTAAATGCTTTTGATATCATCTCTTATTCATCAGGTTTTGACTTGTCCAGTTTGTTTGAGGATACTGAACATAAGAGAGAAGCGCGATTTACTTCTGACAAGCCTGCCTCAATTATTATCTCTAAATTAGAAGAAATTTGTAATCGGCTTCAACTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCAAGCTGGAAGGTTCCAAGGAAGGCAGAAAAGGGCCTTTAGGTATAGATGCAGAGATTTTCGAGATTACACCTGTCTTCCATCTTGTGGAGTTAAAGAAGTCTAATGGAGATACATTGGAGTACCAAAAGCTTCTAAAACAAGACATTAAACCTGCACTTAAGGACATTGTTTGGACATGGCAAGGAGAACATCCACAACAATTGGAGAATGAACTAGTCAAGATGGAGCAAAATCCTTCTCACTCTGGCCAATCAGAGTTTGTAACACAACCAAGTTCTTAA 1407 0.3987 MEPKGSVLMQRYELGKLLGQGTFAKVYHARNIITGMSVAIKMIDKDKVLSVGMIEQIKREISVMRLIKHPNVVELYEVMASKAKIYFVMEYVKGGELFNKVAKGKLNQDVARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVILYVLLAGFLPFRDSNLMEMYRKIGKGDFKFPNWFASDVRRLLSRILDPNPKTRISAAKIMESSWFKRGLVKPTVIANDDKELAPMDADGVFGAYENDTPVAESMHELSKPCNLNAFDIISYSSGFDLSSLFEDTEHKREARFTSDKPASIIISKLEEICNRLQLKVKKKDGGLFKLEGSKEGRKGPLGIDAEIFEITPVFHLVELKKSNGDTLEYQKLLKQDIKPALKDIVWTWQGEHPQQLENELVKMEQNPSHSGQSEFVTQPSS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0185 468 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0185 468 Gene3D Kinase associated domain 1, KA1 317 434 - -
Lan12g0185 468 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Lan12g0185 468 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0185 468 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lan12g0185 468 PANTHER - 2 447 - -
Lan12g0185 468 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0185 468 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Lan12g0185 468 CDD CIPK_C 315 429 - -
Lan12g0185 468 Gene3D Transferase(Phosphotransferase) domain 1 5 316 - -
Lan12g0185 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lan12g0185 468 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 447 - -
Lan12g0185 468 CDD STKc_SnRK3 11 265 - -
Lan12g0185 468 Pfam NAF domain 311 369 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0185 Lan-Chr12 3016834 3018873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0185 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 68.363 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan12g0185 Pkinase 3.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0185 K07198 - gmx:100815651 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0185 12 3016834 3018873 Lan12g0185 12 3016834 3018873 ECH
Lan12g0185 12 3016834 3018873 Lan2g1043 2 21626613 21629373 ECH
Lan13g1193 13 17545986 17547546 Lan12g0185 12 3016834 3018873 PCT