Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0184 ATGTATGTGGCAGAAAACGATGCCGTCGCCGGAGAAGAAGAAGTTTTAATCCCATGCATAGATAAAACGACTGAAACAAAGGACAAGACACCATTCGGCGTCGTTTTGCTAGGAAAATACGAGCTACTAAAATTACTAGGCTCTGGCGCGTTCGCGAAGGTTTACCAAGCGCTGAACGTGGAAACAGGAAAGAGCGTGGCAGTTAAGGCCGTGAGCAAGAAAAAGGTTCTAAAAAACGGTTACACGGCGCAAATAGAACGCGAGATCTCTATCATGCGCCGGCTACGCCACCCGCACATTGCGAAACTCTTCGAAGTTCTCGCCACAAAAACAAAGATCTACCTTATCATGGAATTCGTCCCCGGCGGCGATCTCTACCAAAAAGTCGCCGACGAGGGTCGGTTAACGGAGAATCTCAGCCGGCAATACTTCCGGCAACTAATATCCGCAATGAAGTACTTCCACTCCCACGGCGTTTTCCACCGTGACCTTAAACTCGATAACCTCCTTATCGACGAGAACATGAACATTAAAGTTTCCGATTTCGGGTTAAGCGCCGTTAATAAACAGATCAGATTGGACGGTTTTCTTCATACAACTTGTGGGACCCCTGCTTATCTGGCACCGGAGATTCTTTCAAAGCGAGGTTATGATGGTGCCAGAATTGACGTCTGGTCATGCGGCGTCGTTTTGTTCGCACTACACGCTGGGTATTTACCGTTTAATGGTTACAGCTATGCGGTTATGTACAGGAAGATTTTTAGGGGAATGTTTCGGTTTCCTAAGTGGACATCATGCGAATTGAGAAACCTCATTACGAGGATGTTGGACACTAACCCCAATACAAGGATCACTGTTGATGAGATCATGATTGATCCATGGTTCACACATGGCGGGTTTGTGGATCCTGTAATCGGATTTGAACCCGAATCGGATAAGTACACAGCGAGGGTGAAAGAATTGAATGCATTCGATTTGATATCTTTTGCATCGGGATTAGACATTTCGGGTTTATTTATGGATCCTTCAGATTCTGGTTTCGTGGAACGGCTTCTTTGTATGGAGAGGGTGGAGAGGATTGTGGAGAAAGTGGAGGAGGTGGCGGAGATAGAGAGAGTGGTGGCTAAGAGGGAGGAGAATGGTTGTGGAGGAGTGAGGCTAGAGGGATCAGATGGTAATTTCGTGGTTCTGGTTGGGGTTTACCGTTTAACTGTTGACTTTGTTGTGATTGAGGTGAAGAGTGGGGAGAGAGGGGTGGAAAGTGGTGCAAGGTTTTGGAGAGATAAATTGAGGCCAATGCTTATTGGACTGGCTGAGAAATAG 1323 0.4671 MYVAENDAVAGEEEVLIPCIDKTTETKDKTPFGVVLLGKYELLKLLGSGAFAKVYQALNVETGKSVAVKAVSKKKVLKNGYTAQIEREISIMRRLRHPHIAKLFEVLATKTKIYLIMEFVPGGDLYQKVADEGRLTENLSRQYFRQLISAMKYFHSHGVFHRDLKLDNLLIDENMNIKVSDFGLSAVNKQIRLDGFLHTTCGTPAYLAPEILSKRGYDGARIDVWSCGVVLFALHAGYLPFNGYSYAVMYRKIFRGMFRFPKWTSCELRNLITRMLDTNPNTRITVDEIMIDPWFTHGGFVDPVIGFEPESDKYTARVKELNAFDLISFASGLDISGLFMDPSDSGFVERLLCMERVERIVEKVEEVAEIERVVAKREENGCGGVRLEGSDGNFVVLVGVYRLTVDFVVIEVKSGERGVESGARFWRDKLRPMLIGLAEK* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0184 440 Pfam Protein kinase domain 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0184 440 Gene3D Transferase(Phosphotransferase) domain 1 34 319 - -
Lan12g0184 440 SUPERFAMILY Protein kinase-like (PK-like) 36 311 IPR011009 -
Lan12g0184 440 CDD CIPK_C 322 434 - -
Lan12g0184 440 ProSiteProfiles Protein kinase domain profile. 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0184 440 SMART serkin_6 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0184 440 Pfam NAF domain 319 372 IPR004041 GO:0007165
Lan12g0184 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lan12g0184 440 PANTHER - 25 437 - -
Lan12g0184 440 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Lan12g0184 440 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 25 437 - -
Lan12g0184 440 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Lan12g0184 440 Gene3D Kinase associated domain 1, KA1 320 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0184 Lan-Chr12 2937911 2939304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0184 35 440 CBL-interacting serine-threonine protein kinases AT2G30360 54.106 4.63e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan12g0184 Pkinase 7.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0184 - K12761 gmx:100788245 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0184 12 2937911 2939304 Lan12g0184 12 2937911 2939304 ECH