Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0182 ATGGGGAATTACAGGTTCAAATTATCAGATATGATACCCAATGCCTGGTTTTACAAGCTAAGAGAAATGGGGAGAACAAGAAATCAAAACACCATTTCCTCAAAGAAGAAAAAACAATCTCTATTAGCCTCAACCACACAAAACTCATCAAAACCAAAGCAACCCCACCAATGCAATCCCAGAAAGTCATACTACTTTACAAGAGAACTTGAACCCACAAGCAATAAAATCAACACTTCACCATCAAATACCCCAAAATTTTCACCTGACTCACCCAGAAAATCATTCAAACAAAGAACAAGGAAAAGAACAGTTACAAAGACTTATTCACCAAAACTTGTCAACTCCTCTGTCTCTTCTGGTTGTAACTGCCGCACCACTCTTGATTCTGTTTGGTCTAAACCAGATTCTCCATACTCTTCTTCTCAATTTGATAGCTCTACTGAATCAGAATTCCCTGACCCAGAATTTAGAACTGACCGTGTTCTTCTTCCCATTGAGCCATCTTTTGATGAAATGGTTTCATTGTCCACCAACTCTTGTAGCTGCAACCAAAACAACAACAACAACAACAACAACAAGAACAGTGATATTGTTATCAACGTGGACAAGAATTCTCTACCAAGAAGAAAAGATGGGCATGAATTTGGATCATTCTCAGAGCTTGATTTGCCTCCAATTATAACCAAAGAAATAAAACCCAGAGAACAAAGCAACATGAAAGTGCCAATGAAGGTTAAAATTGTGAAGGAAGATACATCATCAATCAAAGAACAGAGAAATGCCAATGTTAGGAGATTCTCTCTGAGTTCACCAAAGGTTAAGGTTCGTGTCAATTCACCAAGAATTGGGACCAGGAAGGTTCAGTTACTTGGCCGGAAAAGCGTGTCGAACTCCGGCTCCCGGAGAAAACTTTCTGATAGCTTTGCAATTGTGAAGTCATCGTTTAATCCTCAGAAGGATTTCAGAGAGTCAATGATGGAGATGATTGTGGAGAATAACCTTCGGGCCTCAAAAGACTTGGAGGATCTTCTTGCTTGTTACCTTTCTCTTAACTCTGATGAGTATCATGACCTTATTGTCAAAGTTTTCAAGCAAATTTGGTTTGACTTGACTGAAACAAGGTAG 1128 0.3901 MGNYRFKLSDMIPNAWFYKLREMGRTRNQNTISSKKKKQSLLASTTQNSSKPKQPHQCNPRKSYYFTRELEPTSNKINTSPSNTPKFSPDSPRKSFKQRTRKRTVTKTYSPKLVNSSVSSGCNCRTTLDSVWSKPDSPYSSSQFDSSTESEFPDPEFRTDRVLLPIEPSFDEMVSLSTNSCSCNQNNNNNNNNKNSDIVINVDKNSLPRRKDGHEFGSFSELDLPPIITKEIKPREQSNMKVPMKVKIVKEDTSSIKEQRNANVRRFSLSSPKVKVRVNSPRIGTRKVQLLGRKSVSNSGSRRKLSDSFAIVKSSFNPQKDFRESMMEMIVENNLRASKDLEDLLACYLSLNSDEYHDLIVKVFKQIWFDLTETR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0182 375 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 310 372 IPR006458 -
Lan12g0182 375 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 252 373 IPR038933 GO:0045892
Lan12g0182 375 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 233 IPR038933 GO:0045892
Lan12g0182 375 ProSiteProfiles OVATE domain profile. 311 370 IPR006458 -
Lan12g0182 375 MobiDBLite consensus disorder prediction 133 156 - -
Lan12g0182 375 MobiDBLite consensus disorder prediction 28 61 - -
Lan12g0182 375 MobiDBLite consensus disorder prediction 133 150 - -
Lan12g0182 375 MobiDBLite consensus disorder prediction 68 91 - -
Lan12g0182 375 MobiDBLite consensus disorder prediction 28 105 - -
Lan12g0182 375 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 233 - -
Lan12g0182 375 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 252 373 - -
Lan12g0182 375 Pfam Transcriptional repressor, ovate 315 371 IPR006458 -
Lan12g0182 375 Pfam DNA-binding domain 1 39 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0182 Lan-Chr12 2825574 2827229 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan12g0182 Ovate 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0182 - - gmx:100803805 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0182 12 2825574 2827229 Lan12g0182 12 2825574 2827229 ECH
Lan12g0182 12 2825574 2827229 Lan1g0712 1 16095228 16096646 LSH
Lan13g1194 13 17563217 17564789 Lan12g0182 12 2825574 2827229 PCT
Lan12g0182 12 2825574 2827229 Lan13g1194 13 17563217 17564789 PCT