Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0177 ATGGGGTGTTTCATCTTGAAGAGCAAGAAGAAAAGGTCTGATCAAGTCATGCAAACAAATCGTGTCATCGGCAACAATCATGTTCCTGCAGTACTCCCTGAACCTCAAACTCATACCCAGGCACAGTCTGCATCTGCTAGTTTTAGGACCAAATTTGAAACATTTGCCTCCATTAAACAAGTTACCGAGAACAGAACACATGTTTTATCTGCTCCATCAGCTCTTGATCCAGCAGAACATAATGCTTCGGTCTTAGTAGAGCATTTGGAACAAGAAGAGTCTAAACACCATGTTGGACCAATGAAGGAGCAACGTTCGTCTACTCCGCGTGGTGTTATTTCTTTGGCCTCAATTGAGCATAAGGAACGAGAAGAGTCGAGACACCTTGCTGGACTAACAAAAGAGCAGAGTTCACCTACTCCACAACCTTTACCTCTTCCATTACCTCCTTGGAGTTCTTGTGCATTAAAGGGTACTAGCAGGATTAATTCAGGGACACTGAGTGGTCCTCAATATGCCTCTGGATTTTTGCCACTTCCACCTACTGGCCTGCTTCGAAACTTTCTGTATGCGGAAATTGCTGCTGCTTGCGACAATTTCTCTTCAGATCGATGCATGATGAAGTGTCTTTCTTCTGTCGTATATAGAGCCTCCTTCCATGATGATGCTTCAAGTTTAAAGAAGTTTGGGGCCACTGTCAATCTCCTTCACACATCAACTAAAGGTTTGAAGGAATTCATTAATGAGGTTAATACTCTTGCATCACTGCAACATCCATACATCTGCAAGTTGCTAGGATTTCATGCTCGTGTCGGCTCCGAACCGAGGATGTTGGTTTTTGAGAAGTTATGTCATGGAAGCTTGGACCACCTGCTGTTTGGGAAATTTGATGGCCCTCCACTTGATTGGAATACAAGAATAAAAATTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCCATGTATAATGACTTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGCGCAAAGCTTTCGGGATATGGTTGCGTTGGACATGTTTGCGAGGAAGAGATTTCAAACTATTCATCTGCTGTTGGATGCTTACCAGTAGAAACACTGCAAAGAGGAATACTTACTCCGAAGAGCAATGTATGGAGTTTCGGAATTATACTTCTCGAGCTCCTAACCGGTCGAAAGAATCTCGATAGCTATTACCCGAAAGAAGAGAGGGACTTAGTGAAGTGGAGCAGTCCTTTCCTAGTTGATGGTTATAAACTATTGACAATTATGGATCCGAAACTCAAAGGTCGCTTTCCATGTAAAGCAGCAAGAGCATTAGCCGAAATTACACAAAGATGCCTGAAAAAGGAGCCATCTGAAAGACCAAACATGAGAACCGTTGTTAATCATCTCGAAATTGTTCTGGATTTGAGGTACTCTAGGTGGCTAGAGCCAGAAGCATTAATCTCAGGAGAACATATGTTAAGATCACTAAGTCCTAATTGTATCATAAGCACTTCTATTGAACCAAAGCTGAATTTCTCACCACCAAATCTACCAATATCGACACCGCCGCTTTCACCTCCTAGTTGGACTGGTGTGCCATTGCATCCTTCTCAAGCATGTTCATCCACCCTTGTTGAGGAGCTTAATAAGCTGGAAAATGGGTGA 1683 0.4284 MGCFILKSKKKRSDQVMQTNRVIGNNHVPAVLPEPQTHTQAQSASASFRTKFETFASIKQVTENRTHVLSAPSALDPAEHNASVLVEHLEQEESKHHVGPMKEQRSSTPRGVISLASIEHKEREESRHLAGLTKEQSSPTPQPLPLPLPPWSSCALKGTSRINSGTLSGPQYASGFLPLPPTGLLRNFLYAEIAAACDNFSSDRCMMKCLSSVVYRASFHDDASSLKKFGATVNLLHTSTKGLKEFINEVNTLASLQHPYICKLLGFHARVGSEPRMLVFEKLCHGSLDHLLFGKFDGPPLDWNTRIKIAICAAQGLTFLHEEGPFQAMYNDFSTANIQIDKDFSAKLSGYGCVGHVCEEEISNYSSAVGCLPVETLQRGILTPKSNVWSFGIILLELLTGRKNLDSYYPKEERDLVKWSSPFLVDGYKLLTIMDPKLKGRFPCKAARALAEITQRCLKKEPSERPNMRTVVNHLEIVLDLRYSRWLEPEALISGEHMLRSLSPNCIISTSIEPKLNFSPPNLPISTPPLSPPSWTGVPLHPSQACSSTLVEELNKLENG* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0177 560 ProSiteProfiles Protein kinase domain profile. 200 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0177 560 SUPERFAMILY Protein kinase-like (PK-like) 182 482 IPR011009 -
Lan12g0177 560 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 45 555 - -
Lan12g0177 560 Gene3D Phosphorylase Kinase; domain 1 181 281 - -
Lan12g0177 560 Gene3D Transferase(Phosphotransferase) domain 1 283 483 - -
Lan12g0177 560 Pfam Protein tyrosine and serine/threonine kinase 214 475 IPR001245 GO:0004672|GO:0006468
Lan12g0177 560 PANTHER OS01G0588500 PROTEIN-RELATED 45 555 - -
Lan12g0177 560 MobiDBLite consensus disorder prediction 123 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0177 Lan-Chr12 2566117 2569155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0177 186 475 Glycoside Hydrolase AT3G07070 37.748 3.12e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lan12g0177 PK_Tyr_Ser-Thr 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0177 - - gmx:100808712 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0177 12 2566117 2569155 Lan12g0177 12 2566117 2569155 ECH
Lan7g1421 7 19702440 19706458 Lan12g0177 12 2566117 2569155 PCT
Lan11g1650 11 32130113 32134039 Lan12g0177 12 2566117 2569155 PCT
Lan13g1198 13 17604508 17608446 Lan12g0177 12 2566117 2569155 PCT
Lan12g0177 12 2566117 2569155 Lan7g1421 7 19702440 19706458 PCT
Lan12g0177 12 2566117 2569155 Lan11g1650 11 32130113 32134039 PCT
Lan12g0177 12 2566117 2569155 Lan13g1198 13 17604508 17608446 PCT