Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0174 ATGATGATGCAAATGCAACAAATTCTATCCTTGTTTCTTGTTCTTTTTGGTTCAGTACTAGTGATCTCATCAGACCAAGTTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGTTTAGAAGACCCAAAAGGTAAACTCTCAACTTGGAATGAAGATGATTATAGTCCTTGCAATTGGGTTGGTGTTAAATGTGACCCTATAACCAATAGGGTAACTGTTCTTGTTCTTGATGGATTCTCTCTTTCTGGGCATATTGATAGAGGCCTTTTGAGATTGCAATCCCTTCAAGTTCTTTCCCTTTCTAGGAACAACTTCACAGGGGCCATAAACCCTGATCTTCTTACCTTTGGGAGTTTACAAGTTGTAGACTTGAGTGAAAATAATCTCTCTGGGTCGATCCCGGATCGGCTTTTCCAACAATGTTGGTCTCTAAGGGTAGTTTCGTTTGCGAAAAACAACCTTACAGGTAAGATTCCTAATTCTTTGAGCTCATGCTATTCATTGGTGACTTTGAACTTATCCTTTAATCAGCTATATGGGGAGATACCATCTTGGATGTGGTTTTTGAGGGGGCTGCAATCACTTGATCTATCAAATAACTTCCTTGAGGGGGAGATTCCTGAAGGAATTCAGAATCTTTATGATTTGAGGGAGTTAAGGCTCGGGAAGAACCGGTTCACGGGTACGGGTCCTCAGGATATTGGAGGCTGCTTGCTTTTGAAGTTGATTGATTTCAGTGGTAATTTTCTCTCTGGGAAATTTCCTGAGTCAATACAAAGACTCAACTCATGCACATTCCTCAATTTACAGGGAAATTCATTTACTGGTGGTGTTCCGAATTGGATCGGAGAAATGAAAAATCTAGAGGTGTTGGATCTTTCTGAAAATAGATTTTCTGGATGGATTCCAAAATCATTTGGAAATCTTGACTCACTGAGTAGATTGAACTTATCCAGGAATCAGATCACAGGAAACCTTCCCGAATCAATGGTAAATTGCATTAAGCTTTTGGCTCTAGACATTAGCCATAATCACTTGGCAGGTCCTCTTCCTTCATGGATATTTAGGATTGGGTCAAAAAGTACCTACGCTTCTTGGAACAGCTTCAATAAGAGAATTCCGCCTTCACTTGCATCGGTATCTTATGATGGCCTTATGGTTTTGGATTTGTCGTCGAATGCATTTTCCGGCCAGCTTCCATCCAGCGTTGGAGATCTTAGTAGCCTGCAAGTCTTAAATTTGTCTACCAACAATATATCTGGTTCTATTCCAGTGAGTATAGGAGAACTTAAATCTCTATACATTCTTGACTTAAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGTAGGGGCAATTTCTCTCAGTGAACTAAGGCTGCAAAAGAACTTCCTAGGTGGGAGAATTCCGACCAAAATCAACAAGTGTTCATCCCTAAAATATTTGAATCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCTCCCATTGCAAACTTGATCAATCTTGAGCATGTAGATTTGTCATGGAATGAACTCTCCGGAAGTTTACCAAAGGAACTGATGAATCTTACCCAACTATTCTCCTTTAATGTCTCCTACAACCAACTTCAAGGTGAGCTACCAGTTGGTGGCTTTTTCAATATCATCTCCCCCTTATCGGTCTCCGGTAATCCATTGTTATGTGGTTCTGTTGTCAACCATTCCTGCCCACCTGTCCACCCAAAGCCTATTGTCCTAAATCCAAATTCTTCTTACTCCAATTCCAGAGCATCGTTTCAAAATCGGCATCATAAGATGATACTTAGTATCTCTACCCTTATTGCTATTGGTGCAGCTGCTTTTATTGTTATTGGTGTTATGGCTGTTACTGTCCTAAACATCCATGTACGGTCCTCAATGTCGCGTTCTGCTGCTCCATTTGCTTTATCGGGTGGCGAGGACTATAGTTGTTCGCCAGAAAATGATCCAAAATATGGCAAGCTTGTGATGTTTTCTGGTGATGCTGACATTGCTGATGGGGCTCATAATCTTCTTAATAAAGATAATGAAATCGGCCGCGGTGGATTCGGAGTTGTTTATTGCACTGTCCTCCAAGATGGGAAATCTGTTGCAATCAAGAAGCTCACTGTCTCCAGTTTGATCAAATCTCAAGAAGACTTTGAGAGTGAAGTTAAAAAGCTTGGGAAGATGAGGCACCAAAATCTTGTGGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTTCTAATTTATGAGTACCTAGCTAGAGGGAGTTTGCATAAGCTTCTACACAATGATGATAGCGAAACTGTCCTTTCTTGGCGACGAAGGTTCAAGATTATTCTCGGTATGGCAAAAGGGTTGGCCTATTTGCACGAAATGGACATAATCCACTACAATCTAAAGTCCACCAATGTTCTGATAGATTGTACTTATGAGCCAAAAATAGGCGATTTCGGCTTGGTGAGACTATTGCCAATGTTAGACCATTGTGTTTTGAGCAGCAAAGTTCAAAGTGCACTTGGATACATGGCTCCTGAATTCGCATGCCGCACGGTTAAGATAACCGAGAAATGTGATATATATGGTTTTGGAATCCTTGTTCTGGAGGTAGTGACAGGAAAGAAGCCTGTGGAATATATGGAGGATGATGTGATTGTTCTATGTGACATGGTGAGGAGTGCATTGGAAGAAGGCATGGTGGAGCAATGTGTTGATGAGAGGCTTCTACGAAATTTCGCTATCGAAGAAGCTATTCCTGTCATAAAATTGGGCTTAGTTTGTGCATCACAAGTACCATCAAATCGACCGGACATGGCCGAGGTTGTCAGCATATTAGAGTTGATTCAATGCCCTTCAGAAGGACAAGAGGAATTATAA 2901 0.4102 MMMQMQQILSLFLVLFGSVLVISSDQVFNDDVLGLIVFKAGLEDPKGKLSTWNEDDYSPCNWVGVKCDPITNRVTVLVLDGFSLSGHIDRGLLRLQSLQVLSLSRNNFTGAINPDLLTFGSLQVVDLSENNLSGSIPDRLFQQCWSLRVVSFAKNNLTGKIPNSLSSCYSLVTLNLSFNQLYGEIPSWMWFLRGLQSLDLSNNFLEGEIPEGIQNLYDLRELRLGKNRFTGTGPQDIGGCLLLKLIDFSGNFLSGKFPESIQRLNSCTFLNLQGNSFTGGVPNWIGEMKNLEVLDLSENRFSGWIPKSFGNLDSLSRLNLSRNQITGNLPESMVNCIKLLALDISHNHLAGPLPSWIFRIGSKSTYASWNSFNKRIPPSLASVSYDGLMVLDLSSNAFSGQLPSSVGDLSSLQVLNLSTNNISGSIPVSIGELKSLYILDLSDNKLNGSIPSEIVGAISLSELRLQKNFLGGRIPTKINKCSSLKYLNLSHNKLTGSIPAPIANLINLEHVDLSWNELSGSLPKELMNLTQLFSFNVSYNQLQGELPVGGFFNIISPLSVSGNPLLCGSVVNHSCPPVHPKPIVLNPNSSYSNSRASFQNRHHKMILSISTLIAIGAAAFIVIGVMAVTVLNIHVRSSMSRSAAPFALSGGEDYSCSPENDPKYGKLVMFSGDADIADGAHNLLNKDNEIGRGGFGVVYCTVLQDGKSVAIKKLTVSSLIKSQEDFESEVKKLGKMRHQNLVALEGYYWTSSLQLLIYEYLARGSLHKLLHNDDSETVLSWRRRFKIILGMAKGLAYLHEMDIIHYNLKSTNVLIDCTYEPKIGDFGLVRLLPMLDHCVLSSKVQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGKKPVEYMEDDVIVLCDMVRSALEEGMVEQCVDERLLRNFAIEEAIPVIKLGLVCASQVPSNRPDMAEVVSILELIQCPSEGQEEL* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0174 966 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Lan12g0174 966 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Lan12g0174 966 SUPERFAMILY Protein kinase-like (PK-like) 684 957 IPR011009 -
Lan12g0174 966 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 958 - -
Lan12g0174 966 Pfam Protein kinase domain 685 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0174 966 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Lan12g0174 966 Gene3D Phosphorylase Kinase; domain 1 661 760 - -
Lan12g0174 966 Gene3D Transferase(Phosphotransferase) domain 1 761 964 - -
Lan12g0174 966 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Lan12g0174 966 SUPERFAMILY L domain-like 47 357 - -
Lan12g0174 966 CDD STKc_IRAK 690 956 - -
Lan12g0174 966 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Lan12g0174 966 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Lan12g0174 966 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Lan12g0174 966 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Lan12g0174 966 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Lan12g0174 966 Pfam Leucine rich repeat 219 276 IPR001611 GO:0005515
Lan12g0174 966 Gene3D Ribonuclease Inhibitor 289 578 IPR032675 -
Lan12g0174 966 SMART LRR_typ_2 288 311 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 192 215 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 505 528 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 409 431 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 433 457 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 312 336 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 216 239 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 95 114 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 119 143 IPR003591 -
Lan12g0174 966 SMART LRR_typ_2 529 553 IPR003591 -
Lan12g0174 966 SUPERFAMILY L domain-like 368 568 - -
Lan12g0174 966 ProSiteProfiles Leucine-rich repeat profile. 483 506 IPR001611 GO:0005515
Lan12g0174 966 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 958 - -
Lan12g0174 966 ProSiteProfiles Protein kinase domain profile. 684 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0174 966 PRINTS Leucine-rich repeat signature 195 208 - -
Lan12g0174 966 PRINTS Leucine-rich repeat signature 433 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0174 Lan-Chr12 2468656 2472784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0174 12 964 Receptor kinase-like Gene Family AT5G01890 60.644 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan12g0174 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0174 - - gmx:100791204 1529.23