Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0172 ATGGATTATTCTGCTTACAACATTCAACAACAACAACAACAACAAGAAGCTTATAACTATGACCCTTCATCATATCAAATGCAACCTTATAATCCATCATATCCATATCAACAATATTATCCTTATTCTCAACAATACCCATATTACCCTCACACCGTTTCCGACACCACTTACCAACCTCACCTTCAATACCAACCCGAAACCAACCCGGTTCACCCTCCTGGTGTCAACCCTACCGCTACTGAACCGCTTTCCCGAACCCCCGCACACGTCCCGACTGGGCCATCTCAATACAGAGGCAGGGGTGGTAGAGCATTTAGAGGGGGTGGTCGAGGCAGGGGACGTAGACTGAATGGTGGTAAACACTTTCCGTCCCATGCACCTGCTGCTGCCGGAGCCACTTCGGTGATACACCCTTCATCTTCAGTCTCTGGGCAAACACCAGCTCATGTTCCAGCTGCACCGTTGCAACCACCATCACGTCATGTGCAATGTGAAATTTGTAAGGTTGAGTGCAATACTCTAGAAATCTTGGAGCAGCATAAGAATGGAAAAAAACATAAGAAGAATATGAAAGTGCATGAAGAGTTGCAGAGACGCAAAGGTACAAATGGACAGCAGAGTGTACTGATTCATAGCCCTCAAGAATCTGAGAGAAAAGGATTCCCCACAGGATATATGGGCTCTGAAGTTACAGCCATAACTGGACAACAGAATTTACTGATTCCGAGCACTCAATCGAATTACACAGCTACTCAAGTTCAGGAAAATATGGTCTCTGAAGTTACACCTGATAAAGAGCTTCAGAATAACGAGGGACAGACATCTCAAGCTCCAGCTGAAGAGCTTGCAGGGAAAACCACAGATAACTCTGCTGTAAGGGGCCGTGGATTGAAGCGTAAGACAAAAGGAGGCAGAGGAGGTAAATCCATGAGGACTGATGATGGGTCAAGAAGGCGAGTGGAGCCTCCAAAACCTCAGCTGGCGAAATCTTTTATATGTGAGGTTTGCAATGTTAAATGTGAGAGCCAAGTTGTTTACGACAGTCATCTGGTCGGGAAAAAGCACTTGGCACGTCTTAATCGTGTCCATGGCAGACAGTCTACAGTAGCAGGGTTTCAAACACTTTACCCAACTACTGACATCAATGCTCTGGCAAATGCAATTAATGTCCAAATTCAACAAGGTGATAGTGATCCGCAAGTCCTTCTGGCTCAGCTCCTGGTGACTCTAATATCTCAAACACAACAACCAGCTACGACACCAACTTCAAGCTCTCTGGCTGCTACTCAGGTAACGGCAGCCGCATCTGTAGCTGGATCAAGCAATGAACCGCAGTTGTCTCAGACACAAACATCAGAAACCACATCGAAAGTTGAGATGGGAAATCCTACTGGGGAGGCCAATAATATGCTCTTATCTGCCCCACTGTTATCTGATCTGCCTGGTTCAATTAGTGCTCTGTCAAACTCAATTACTGCTCAGATCCAACAAGGTGTTAGTGATCCACAGGTCCTTTTGGCCAACCTCCTCACAACAATCCTGTCTCAAACACAAGTACCAGCAATAGCACCACCATCTGTGGCTACTCAGATACCCGCACCCTCGTCTTTGGCTGAATCAAATATCGGACCCCAGTTGTTGCCGGCACAAGTGTCAGAAGTCACAGCACATGTTGAGATGGAAAATCCTGCTGCAGAAACAAAAAATCAGCCGCCATCTGTCGCGCTTGAGTTGGATGCTCCGGCAGGTTTAGAGTAG 1761 0.4651 MDYSAYNIQQQQQQQEAYNYDPSSYQMQPYNPSYPYQQYYPYSQQYPYYPHTVSDTTYQPHLQYQPETNPVHPPGVNPTATEPLSRTPAHVPTGPSQYRGRGGRAFRGGGRGRGRRLNGGKHFPSHAPAAAGATSVIHPSSSVSGQTPAHVPAAPLQPPSRHVQCEICKVECNTLEILEQHKNGKKHKKNMKVHEELQRRKGTNGQQSVLIHSPQESERKGFPTGYMGSEVTAITGQQNLLIPSTQSNYTATQVQENMVSEVTPDKELQNNEGQTSQAPAEELAGKTTDNSAVRGRGLKRKTKGGRGGKSMRTDDGSRRRVEPPKPQLAKSFICEVCNVKCESQVVYDSHLVGKKHLARLNRVHGRQSTVAGFQTLYPTTDINALANAINVQIQQGDSDPQVLLAQLLVTLISQTQQPATTPTSSSLAATQVTAAASVAGSSNEPQLSQTQTSETTSKVEMGNPTGEANNMLLSAPLLSDLPGSISALSNSITAQIQQGVSDPQVLLANLLTTILSQTQVPAIAPPSVATQIPAPSSLAESNIGPQLLPAQVSEVTAHVEMENPAAETKNQPPSVALELDAPAGLE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0172 586 PANTHER OS06G0651300 PROTEIN-RELATED 1 471 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 65 111 - -
Lan12g0172 586 Gene3D Classic Zinc Finger 309 362 - -
Lan12g0172 586 Gene3D Classic Zinc Finger 156 196 - -
Lan12g0172 586 SUPERFAMILY beta-beta-alpha zinc fingers 324 362 IPR036236 -
Lan12g0172 586 SMART c2h2final6 163 187 IPR013087 -
Lan12g0172 586 SMART c2h2final6 332 356 IPR013087 -
Lan12g0172 586 MobiDBLite consensus disorder prediction 263 284 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 562 586 - -
Lan12g0172 586 SMART ZnF_U1_5 329 363 IPR003604 GO:0003676|GO:0008270
Lan12g0172 586 SMART ZnF_U1_5 160 194 IPR003604 GO:0003676|GO:0008270
Lan12g0172 586 Pfam Zinc-finger of C2H2 type 164 187 - -
Lan12g0172 586 Pfam Zinc-finger of C2H2 type 332 356 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 307 325 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 137 158 - -
Lan12g0172 586 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 1 471 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 438 468 - -
Lan12g0172 586 MobiDBLite consensus disorder prediction 263 325 - -
Lan12g0172 586 SUPERFAMILY beta-beta-alpha zinc fingers 155 195 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0172 Lan-Chr12 2416026 2422274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0172 - - lang:109362174 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g1002 13 14586974 14591882 Lan12g0172 12 2416026 2422274 PCT
Lan12g0172 12 2416026 2422274 Lan13g1002 13 14586974 14591882 PCT